RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 CAPN10Q9HC96 672 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ENOPH1Q9UHY7 261 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ATXN7L1Q9ULK2 861 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CDC14AQ9UNH5 594 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CHST2Q9Y4C5 530 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 RP1P56715 2156 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 UNC13CQ8NB66 2214 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ADAMTS9Q9P2N4 1935 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 OR2W5A6NFC9 320 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 NKX2-2O95096 273 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CRHBPP24387 322 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 GABRA3P34903 492 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 OR1D4P47884 311 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CD83Q01151 205 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 DGCR6Q14129 220 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 LARS2Q15031 903 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 SEC23BQ15437 767 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 GPR68Q15743 365 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 PARP8Q8N3A8 854 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 GTPBP3Q969Y2 492 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 OR1F2PQ96R84 312 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 LMF2Q9BU23 707 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 SAP130Q9H0E3 1048 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 FOLH1BQ9HBA9 442 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 FGF21Q9NSA1 209 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 AGAP5A6NIR3 686 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 PATE3B3GLJ2 98 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 THBS1P07996 1170 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ATXN8OSP0DMR3 200 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 POU2F1P14859 743 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 EEF1B2P24534 225 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CNR2P34972 360 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 HAAOP46952 286 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ALDH3B2P48448 385 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 NUP107P57740 925 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CDK5R2Q13319 367 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ZNHIT3Q15649 155 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 PRAMEF17Q5VTA0 474 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 LAIR2Q6ISS4 152 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 EID2Q8N6I1 236 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 CNIH3Q8TBE1 160 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 NR4A3Q92570 626 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF501Q96CX3 271 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF578Q96N58 590 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 FUZQ9BT04 418 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 LANCL2Q9NS86 450 aa13.26□□□□□ -0.29
C9orf3-202ENST00000297979 GPR55Q9Y2T6 319 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 HEMK1Q9Y5R4 338 aaPredicted RBP13.26□□□□□ -0.29
C9orf3-202ENST00000297979 KIAA0513O60268 411 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 PRAMEF2O60811 474 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 CPNE6O95741 557 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ADAP00813 363 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 GASTP01350 101 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 IFNA16P05015 189 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 AGXTP21549 392 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 RPS4Y1P22090 263 aaKnown RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 SSTR4P31391 388 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 EMDP50402 254 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 BIKQ13323 160 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF267Q14586 743 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 EIPR1Q53HC9 387 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 YOD1Q5VVQ6 348 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF836Q6ZNA1 936 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 MED25Q71SY5 747 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 TMPRSS9Q7Z410 1059 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 CLIP4Q8N3C7 705 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ADAMTS16Q8TE57 1224 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 NAT6Q93015 286 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 MMACHCQ9Y4U1 282 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 GXYLT2A0PJZ3 443 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 HRKO00198 91 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 SLC1A7O00341 560 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 DSCR3O14972 297 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 FRS3O43559 492 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 HYAL3O43820 417 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 OR10H3O60404 316 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 CER1O95813 267 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 RPLP0P05388 317 aaKnown RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 GALNSP34059 522 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 GABARAPL2P60520 117 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 B2MP61769 119 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 CCL7P80098 99 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 DSG2Q14126 1118 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 FIGNL1Q6PIW4 674 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF773Q6PK81 442 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF574Q6ZN55 896 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-202ENST00000297979 SLC7A13Q8TCU3 470 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 FKBP10Q96AY3 582 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 MAN2C1Q9NTJ4 1040 aa13.25□□□□□ -0.29
C9orf3-202ENST00000297979 A0A1W2PQM1 296 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 PFDN1O60925 122 aa13.24□□□□□ -0.29
C9orf3-202ENST00000297979 OR6B1O95007 311 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms