RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SLC16A6O15403 523 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 UGT2B17O75795 530 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 CDH2P19022 906 aaPredicted RBP21.17■□□□□ 0.98
PTX3-201ENST00000295927 ELAVL4P26378 380 aaKnown RBP21.17■□□□□ 0.98
PTX3-201ENST00000295927 NUBP1P53384 320 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 SMIM11AP58511 58 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 NNATQ16517 81 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 FLYWCH1Q4VC44 716 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 PRRC1Q96M27 445 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 FNDC11Q9BVV2 318 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 PRR14Q9BWN1 585 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 RXFP3Q9NSD7 469 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 TMCC3Q9ULS5 477 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 TTC36A6NLP5 189 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 TPST2O60704 377 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 ONECUT2O95948 504 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 IGKV3-11P04433 115 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 GUSBP08236 651 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 CYP4B1P13584 511 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 RGS8P57771 180 aaPredicted RBP21.17■□□□□ 0.98
PTX3-201ENST00000295927 LIN52Q52LA3 116 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 EIPR1Q53HC9 387 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 DCST1Q5T197 706 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 ZNF721Q8TF20 911 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 GRIP2Q9C0E4 1043 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 CTPS2Q9NRF8 586 aa21.17■□□□□ 0.98
PTX3-201ENST00000295927 ARRDC5A6NEK1 342 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 CCL4P13236 92 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 NID1P14543 1247 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 SEC23BQ15437 767 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 TTC33Q6PID6 262 aaPredicted RBP21.16■□□□□ 0.98
PTX3-201ENST00000295927 LANCL3Q6ZV70 420 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 OVCH1Q7RTY7 1134 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 C8orf59Q8N0T1 100 aaPredicted RBP21.16■□□□□ 0.98
PTX3-201ENST00000295927 SLC46A1Q96NT5 459 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 NIPSNAP1Q9BPW8 284 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 FUZQ9BT04 418 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 C14orf105Q9NVL8 296 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 CBLCQ9ULV8 474 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 MYRFQ9Y2G1 1151 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 OR10H1Q9Y4A9 318 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 A0A1W2PRQ8 180 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 H3BNH8 94 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 UGT2B11O75310 529 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 CBLP22681 906 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 HOXC5Q00444 222 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 MC2RQ01718 297 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 DGCR6Q14129 220 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 FAAH2Q6GMR7 532 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 ZNF770Q6IQ21 691 aaPredicted RBP21.16■□□□□ 0.98
PTX3-201ENST00000295927 NAXDQ8IW45 347 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 ZNF786Q8N393 782 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 ZSCAN1Q8NBB4 408 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 SUMF1Q8NBK3 374 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 OR14A16Q8NHC5 309 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 SLC7A13Q8TCU3 470 aa21.16■□□□□ 0.98
PTX3-201ENST00000295927 DAZLQ92904 295 aaKnown RBP21.16■□□□□ 0.98
PTX3-201ENST00000295927 PAPOLBQ9NRJ5 636 aaKnown RBP21.16■□□□□ 0.98
PTX3-201ENST00000295927 BCKDKO14874 412 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 CCNYL3P0C7X3 344 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 CLK3P49761 638 aaKnown RBP21.15■□□□□ 0.98
PTX3-201ENST00000295927 RNF144AP50876 292 aaPredicted RBP21.15■□□□□ 0.98
PTX3-201ENST00000295927 MRPL2Q5T653 305 aaKnown RBP21.15■□□□□ 0.98
PTX3-201ENST00000295927 RNF220Q5VTB9 566 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 AQP11Q8NBQ7 271 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 FKBP10Q96AY3 582 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 NUDT9Q9BW91 350 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 MAN2C1Q9NTJ4 1040 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 POFUT2Q9Y2G5 429 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 KIF26BQ2KJY2 2108 aa21.15■□□□□ 0.98
PTX3-201ENST00000295927 FAAHO00519 579 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 PRKNO60260 465 aaPredicted RBP21.14■□□□□ 0.98
PTX3-201ENST00000295927 CPNE3O75131 537 aaKnown RBP21.14■□□□□ 0.98
PTX3-201ENST00000295927 SMIM18P0DKX4 95 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 EPHA2P29317 976 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 TPD52P55327 224 aaPredicted RBP21.14■□□□□ 0.98
PTX3-201ENST00000295927 TAS2R41P59536 307 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 NPRL3Q12980 569 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 ZNF691Q5VV52 312 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 LCN10Q6JVE6 187 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 RBM44Q6ZP01 1051 aaKnown RBP21.14■□□□□ 0.98
PTX3-201ENST00000295927 THAP5Q7Z6K1 395 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 BCORP1Q8N888 145 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 ART5Q96L15 291 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 G6PC3Q9BUM1 346 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 EDEM2Q9BV94 578 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 GABARAPL3Q9BY60 117 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 ZNF556Q9HAH1 456 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 FBXO8Q9NRD0 319 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 CFL2Q9Y281 166 aa21.14■□□□□ 0.98
PTX3-201ENST00000295927 CDHR4A6H8M9 788 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 SYNDIG1LA6NDD5 238 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 CPSF4LA6NMK7 179 aaKnown RBP21.14■□□□□ 0.97
PTX3-201ENST00000295927 IDSB3KWA1 339 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 MEN1O00255 615 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 AP3D1O14617 1153 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 OXSR1O95747 527 aaPredicted RBP21.14■□□□□ 0.97
PTX3-201ENST00000295927 GASTP01350 101 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 HEXBP07686 556 aa21.14■□□□□ 0.97
PTX3-201ENST00000295927 POU2F1P14859 743 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms