RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 NLGN4YQ8NFZ3 816 aaPredicted RBP5.78□□□□□ -1.48
VCAM1-201ENST00000294728 VN1R2Q8NFZ6 395 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 HAVCR2Q8TDQ0 301 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 UCN3Q969E3 161 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 NUS1Q96E22 293 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 CDCA3Q99618 268 aaPredicted RBP5.78□□□□□ -1.48
VCAM1-201ENST00000294728 HDAC8Q9BY41 377 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 RNF32Q9H0A6 362 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 GHITMQ9H3K2 345 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 GLIPR2Q9H4G4 154 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 FAM86C1Q9NVL1 165 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 CES1P1Q9UKY3 287 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 NUBP2Q9Y5Y2 271 aa5.78□□□□□ -1.48
VCAM1-201ENST00000294728 FAM240BA0A1B0GVZ2 78 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 DUXAA6NLW8 204 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 TGM5O43548 720 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RFPL3O75679 317 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 XPAP23025 273 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 APEX1P27695 318 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 NTSP30990 170 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 THBS2P35442 1172 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OR3A3P47888 321 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SLC6A11P48066 632 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MMP15P51511 669 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 TP53BP2Q13625 1128 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 DYRK1AQ13627 763 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PGGHGQ32M88 737 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ZNF311Q5JNZ3 666 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ZBTB37Q5TC79 503 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 FAM46CQ5VWP2 391 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 DEF8Q6ZN54 512 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ZNF620Q6ZNG0 422 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 TMEM91Q6ZNR0 172 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 IQCHQ86VS3 1027 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RAB42Q8N4Z0 105 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OR6T1Q8NGN1 323 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SPPL3Q8TCT6 385 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ADAMTS14Q8WXS8 1223 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 UPRTQ96BW1 309 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 C1GALT1C1Q96EU7 318 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SENP5Q96HI0 755 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 FYTTD1Q96QD9 318 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 GPA33Q99795 319 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MRI1Q9BV20 369 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ATP13A2Q9NQ11 1180 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MED9Q9NWA0 146 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MCUBQ9NWR8 336 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RHCGQ9UBD6 479 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 EIF3KQ9UBQ5 218 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 FBXL21Q9UKT6 434 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 NUP50Q9UKX7 468 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SATB2Q9UPW6 733 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 CKAP5Q14008 2032 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 BRWD1Q9NSI6 2320 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MDC1Q14676 2089 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 A0A0G2JMP0 313 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OR6C70A6NIJ9 312 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 FAM227AF5H4B4 570 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 CASKO14936 926 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 BET1O15155 118 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 EMC8O43402 210 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 POP7O75817 140 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OR2B3O76000 313 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SOX14O95416 240 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 CHRM4P08173 479 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SAGP10523 405 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 NR2F1P10589 423 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MAGP20916 626 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RPS4Y1P22090 263 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 AHCYP23526 432 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 MNDAP41218 407 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 CDH11P55287 796 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 RACK1P63244 317 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PRR5P85299 388 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PITPNAQ00169 270 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 DHODHQ02127 395 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 POU4F2Q12837 409 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PIN1Q13526 163 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 WSCD2Q2TBF2 565 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 CCDC58Q4VC31 144 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 TNFAIP8L2Q6P589 184 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SMARCD3Q6STE5 483 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PAQR6Q6TCH4 344 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 FGD2Q7Z6J4 655 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 LILRA3Q8N6C8 439 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OR8D4Q8NGM9 314 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 NEIL3Q8TAT5 605 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 OTUB1Q96FW1 271 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 LCORQ96JN0 433 aaPredicted RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 SMG9Q9H0W8 520 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 PLEKHA1Q9HB21 404 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 B3GAT2Q9NPZ5 323 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 TDP1Q9NUW8 608 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 LYARQ9NX58 379 aaKnown RBP5.77□□□□□ -1.49
VCAM1-201ENST00000294728 ABRACLQ9P1F3 81 aa5.77□□□□□ -1.49
VCAM1-201ENST00000294728 EDDM13A0A1B0GTR0 161 aa5.76□□□□□ -1.49
VCAM1-201ENST00000294728 LRIT2A6NDA9 550 aa5.76□□□□□ -1.49
VCAM1-201ENST00000294728 WASHC1A8K0Z3 465 aa5.76□□□□□ -1.49
VCAM1-201ENST00000294728 B8ZZF3 427 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms