RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 UGT2B7P16662 529 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CSNK2A1P68400 391 aaPredicted RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 E2F1Q01094 437 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 RBPJQ06330 500 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 DCST2Q5T1A1 773 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CPZQ66K79 652 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CWF19L1Q69YN2 538 aaKnown RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 DTWD1Q8N5C7 304 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 DPH1Q9BZG8 443 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CCDC59Q9P031 241 aaKnown RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 CENPBD1B2RD01 187 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 TMEM239Q8WW34 195 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.39
PCDH1-201ENST00000287008 EGLN2Q96KS0 407 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 SAMD8Q96LT4 415 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 UBQLN4Q9NRR5 601 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 WBP1LQ9NX94 342 aa17.46■□□□□ 0.39
PCDH1-201ENST00000287008 A0A1W2PPW3 197 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 GALR3O60755 368 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RBBP9O75884 186 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 SCGB1D2O95969 90 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ANXA3P12429 323 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 TPMTP51580 245 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 PIGGQ5H8A4 983 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 LAS2Q8IYD9 372 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 THAP6Q8TBB0 222 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 C12orf43Q96C57 262 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 SLC7A7Q9UM01 511 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 KCNIP3Q9Y2W7 256 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 NPIPA5A0A0B4J1W7 369 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 A6NIZ1 184 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 NPIPA7E9PJI5 369 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 MMP2P08253 660 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 NPIPA8P0DM63 369 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 CNR2P34972 360 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RBMXP38159 391 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 AP2S1P53680 142 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RAP1BP61224 184 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RAP1AP62834 184 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RPL19P84098 196 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ENDOVQ8N8Q3 282 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 CCDC120Q96HB5 630 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 SLC6A18Q96N87 628 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF300Q96RE9 604 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 C1GALT1Q9NS00 363 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 EXTL2Q9UBQ6 330 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 MMP17Q9ULZ9 603 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 BOKQ9UMX3 212 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 HS3ST3A1Q9Y663 406 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 DNAJB5O75953 348 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 EEF1A2Q05639 463 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 APOFQ13790 326 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF77Q15935 545 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ATAD3CQ5T2N8 411 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 TSPYL5Q86VY4 417 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 OR13H1Q8NG92 308 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 OR51L1Q8NGJ5 315 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ARL5BQ96KC2 179 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 MNTQ99583 582 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 LMF2Q9BU23 707 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 FAM118AQ9NWS6 357 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 PCDHGA10Q9Y5H3 936 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 HSPE1-MOB4S4R3N1 261 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 CXCL10P02778 98 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 LCATP04180 440 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 IMPA1P29218 277 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 PTGER1P34995 402 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 RRADP55042 308 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 SMAD4Q13485 552 aaKnown RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ERV3-1Q14264 604 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF423Q2M1K9 1284 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 CDS1Q92903 461 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 ACSS1Q9NUB1 689 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 IL37Q9NZH6 218 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 CBLCQ9ULV8 474 aa17.45■□□□□ 0.38
PCDH1-201ENST00000287008 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
PCDH1-201ENST00000287008 TPTEP56180 551 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 CHRFAM7AQ494W8 412 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 XKR5Q6UX68 686 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 IL20RBQ6UXL0 311 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF584Q8IVC4 421 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 MFSD9Q8NBP5 474 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 OR51Q1Q8NH59 317 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF442Q9H7R0 627 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF69Q9UC07 566 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ADAM29Q9UKF5 820 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 PADI1Q9ULC6 663 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 CMAHPQ9Y471 501 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 PPP1R3DO95685 299 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 S100A9P06702 114 aaKnown RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 GSTT2P0CG29 244 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 POU3F2P20265 443 aaPredicted RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 TMEM52BQ4KMG9 183 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 KCTD11Q693B1 232 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 CYB561A3Q8NBI2 242 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 CASTOR1Q8WTX7 329 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ATG5Q9H1Y0 275 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 NXT1Q9UKK6 140 aaKnown RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 PCDHGA6Q9Y5G7 932 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 ARNTLO00327 626 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms