RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 HNRNPCL2B2RXH8 293 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 HNRNPCL3B7ZW38 293 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 TLX2O43763 284 aaPredicted RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 HNRNPCL4P0DMR1 293 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 PBLDP30039 288 aaPredicted RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 AVPR1BP47901 424 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 CCT3P49368 545 aaKnown RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 FABP5Q01469 135 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 GPR176Q14439 515 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 FGFBP1Q14512 234 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 BCL2L15Q5TBC7 163 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 CD276Q5ZPR3 534 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 ACSM5Q6NUN0 579 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 ARSKQ6UWY0 536 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 RASSF6Q6ZTQ3 369 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 C17orf64Q86WR6 236 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 TMIEQ8NEW7 156 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 SUN3Q8TAQ9 357 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 RGMAQ96B86 450 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 NUS1Q96E22 293 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 SLC35G5Q96KT7 338 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 MENTQ9BUN1 341 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 HDHD2Q9H0R4 259 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 PRKAG2Q9UGJ0 569 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 A0A0A6YYD5 115 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 A8MUA0 341 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 AKAP8O43823 692 aaKnown RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 SLC28A2O43868 658 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 UBXN7O94888 489 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 EPPINO95925 133 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 IGHA1P01876 353 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 RPN2P04844 631 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 IFNA16P05015 189 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 C8AP07357 584 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 MEF2AQ02078 507 aaPredicted RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 TSPAN31Q12999 210 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 CCDC85BQ15834 202 aaPredicted RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 TMEM52BQ4KMG9 183 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 ADGRD2Q7Z7M1 963 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 RBM45Q8IUH3 476 aaKnown RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 ANKRD53Q8N9V6 530 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 OR11H7Q8NGC8 314 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 OR11H4Q8NGC9 324 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 OR8K5Q8NH50 307 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 RBPMSQ93062 196 aaKnown RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 HGDQ93099 445 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 OTULINQ96BN8 352 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 COX14Q96I36 57 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 ARHGDIGQ99819 225 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 DPCDQ9BVM2 203 aaPredicted RBP9.73□□□□□ -0.85
SKA1-201ENST00000285116 GHITMQ9H3K2 345 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 UCKL1Q9NWZ5 548 aa9.73□□□□□ -0.85
SKA1-201ENST00000285116 ABHD14A-ACY1A0A1B0GW23 586 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SH3BP5O60239 455 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 MOSPD3O75425 235 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 PRNPP04156 253 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 LIMS3P0CW19 117 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 LIMS4P0CW20 117 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 PRKACAP17612 351 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CCR8P51685 355 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 GBX2P52951 348 aaPredicted RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 CTBP2P56545 445 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 RPS26P62854 115 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 LRRC32Q14392 662 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 GRIN2CQ14957 1233 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SLC27A4Q6P1M0 643 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 COMTD1Q86VU5 262 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CXorf40AQ8TE69 158 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 MYLIPQ8WY64 445 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 ACOT12Q8WYK0 555 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 RNFT2Q96EX2 444 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SENP5Q96HI0 755 aaPredicted RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 RADILQ96JH8 1075 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SORBS1Q9BX66 1292 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 OR2AG1Q9H205 316 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 OR51I1Q9H343 314 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 ERVMER34-1Q9H9K5 563 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TDP1Q9NUW8 608 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SLCO1C1Q9NYB5 712 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 PTPRSQ13332 1948 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TUBAL3A6NHL2 446 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TOR1AO14656 332 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 NDUFS4O43181 175 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CHST10O43529 356 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CLEC3AO75596 197 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
SKA1-201ENST00000285116 EPHX1P07099 455 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CISD3P0C7P0 127 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 CCR2P41597 374 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 MTNR1AP48039 350 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 SPDYE7PQ495Y7 208 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TMEM35AQ53FP2 167 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 OR2G6Q5TZ20 316 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 BHLHB9Q6PI77 547 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 UBE3DQ7Z6J8 389 aa9.72□□□□□ -0.85
SKA1-201ENST00000285116 TRAPPC5Q8IUR0 188 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms