RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TREML2Q5T2D2 321 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 HES5Q5TA89 166 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CD300LGQ6UXG3 332 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CLEC20AQ6ZU45 233 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RIPK3Q9Y572 518 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MYO7AQ13402 2215 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SRPXP78539 464 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CES4AQ5XG92 561 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 FBXL22Q6P050 247 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 GATSQ8NAP1 163 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TXNDC5Q8NBS9 432 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 COG8Q96MW5 612 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SEC14L6B5MCN3 397 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 KIAA0355O15063 1070 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 UBL4AP11441 157 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 HOXB2P14652 356 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 PRKACGP22612 351 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CATSPEREQ5SY80 951 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 KRTCAP2Q8N6L1 136 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TFAP2BQ92481 460 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 CMSS1Q9BQ75 279 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM98Q9Y2Y6 226 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 NPC1O15118 1278 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 MEGF6O75095 1541 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RFPL3O75679 317 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TGFBR3Q03167 851 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SFRP5Q5T4F7 317 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ATRNL1Q5VV63 1379 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 RBMS3Q6XE24 437 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 SLC30A7Q8NEW0 376 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ALG8Q9BVK2 526 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF160Q9HCG1 818 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TXNL4BQ9NX01 149 aaKnown RBP8.3□□□□□ -1.08
NIPBL-201ENST00000282516 PCDHGA7Q9Y5G6 932 aa8.3□□□□□ -1.08
NIPBL-201ENST00000282516 TRAV18A0A075B6X5 111 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 TTC24A2A3L6 582 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IMPA2O14732 288 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRKACBP22694 351 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SRYQ05066 204 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 OR2A12Q8NGT7 310 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ST7LQ8TDW4 575 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ACOT11Q8WXI4 607 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 LGALS12Q96DT0 336 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 KCNK6Q9Y257 313 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ARHGEF17Q96PE2 2063 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SCN8AQ9UQD0 1980 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 C1orf226A1L170 272 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 E7ESA3 106 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 MED6O75586 246 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ACY1Q03154 408 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NFATC4Q14934 902 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 MEX3BQ6ZN04 569 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF417Q8TAU3 575 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IRF7Q92985 503 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NLE1Q9NVX2 485 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 HLA-AP01891 365 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 DRD2P14416 443 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 HTR3AP46098 478 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 KCNAB2Q13303 367 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 HACD4Q5VWC8 232 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SCAMP5Q8TAC9 235 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 OR1A2Q9Y585 309 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 H7BY64 318 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SRPX2O60687 465 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 RAB3DO95716 219 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 MC3RP41968 323 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 RPS15P62841 145 aaKnown RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRAMEF8Q5VWM4 474 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRAMEF7Q5VXH5 474 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 C15orf54Q8N8G6 183 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 OR6C4Q8NGE1 309 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRAP1Q96NZ9 151 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 LMF1Q96S06 567 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 SLC6A17Q9H1V8 727 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 GPR83Q9NYM4 423 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NLKQ9UBE8 527 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 A0A1W2PRU2 124 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 F6UZH7 168 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 GSRP00390 522 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IMPA1P29218 277 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PBX1P40424 430 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NANOGP8Q6NSW7 305 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 IL22RA1Q8N6P7 574 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 OR52E2Q8NGJ4 325 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PAQR8Q8TEZ7 354 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 KCNA7Q96RP8 456 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 CENPOQ9BU64 300 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 NANOGQ9H9S0 305 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PENKP01210 267 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-201ENST00000282516 GPM6BQ13491 265 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 TAF9Q16594 264 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 MPEG1Q2M385 716 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 ACTBL2Q562R1 376 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 GCNT2Q8N0V5 402 aa8.29□□□□□ -1.08
NIPBL-201ENST00000282516 PRR18Q8N4B5 295 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms