RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PDX1P52945 283 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 GDPD1Q8N9F7 314 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 OR7G2Q8NG99 324 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 OR4Q3Q8NH05 313 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 OR52N1Q8NH53 320 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 CTRCQ99895 268 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 MKRN2Q9H000 416 aaKnown RBP23.4■■□□□ 1.34
ROM1-201ENST00000278833 MIXL1Q9H2W2 232 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 KRCC1Q9NPI7 259 aaPredicted RBP23.4■■□□□ 1.34
ROM1-201ENST00000278833 CTPS2Q9NRF8 586 aa23.4■■□□□ 1.34
ROM1-201ENST00000278833 RGS5O15539 181 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 SLC35G6P0C7Q6 338 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 DUSP8Q13202 625 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 ASAH1Q13510 395 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 GPR50Q13585 617 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 DSG2Q14126 1118 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 SUZ12Q15022 739 aaKnown RBP23.39■■□□□ 1.34
ROM1-201ENST00000278833 LTB4RQ15722 352 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 FAM111BQ6SJ93 734 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 USP53Q70EK8 1073 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 RRM2BQ7LG56 351 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 GDF7Q7Z4P5 450 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 UBQLNLQ8IYU4 475 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 SLC9A6Q92581 669 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 SLC41A3Q96GZ6 507 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 MCHR1Q99705 422 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 PHF7Q9BWX1 381 aaPredicted RBP23.39■■□□□ 1.34
ROM1-201ENST00000278833 HOXD1Q9GZZ0 328 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 NLGN3Q9NZ94 848 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 MOSPD1Q9UJG1 213 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 CARD8Q9Y2G2 431 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 GSTK1Q9Y2Q3 226 aa23.39■■□□□ 1.34
ROM1-201ENST00000278833 HMGN1P05114 100 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 ZNF888P0CJ79 500 aaPredicted RBP23.39■■□□□ 1.33
ROM1-201ENST00000278833 TRAPPC2P0DI81 140 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 TRAPPC2BP0DI82 140 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 IL7P13232 177 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 NTSR1P30989 418 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 GDI1P31150 447 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 SLC1A3P43003 542 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 CDH11P55287 796 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 RPS25P62851 125 aaKnown RBP23.39■■□□□ 1.33
ROM1-201ENST00000278833 NXNL2Q5VZ03 156 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 TYW3Q6IPR3 259 aaKnown RBP23.39■■□□□ 1.33
ROM1-201ENST00000278833 ZNF544Q6NX49 715 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 HMGN2P46Q86SG4 172 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 PEX5LQ8IYB4 626 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 GANCQ8TET4 914 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 ZG16BQ96DA0 208 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 EQTNQ9NQ60 294 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 CNIH4Q9P003 139 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 TBC1D29Q9UFV1 150 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 MUTYHQ9UIF7 546 aa23.39■■□□□ 1.33
ROM1-201ENST00000278833 CHST10O43529 356 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 THY1P04216 161 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 HTR1FP30939 366 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 HNRNPA0Q13151 305 aaKnown RBP23.38■■□□□ 1.33
ROM1-201ENST00000278833 NFATC4Q14934 902 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 C22orf42Q6IC83 251 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 OR8H2Q8N162 312 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 CELF2-AS1Q8N7Q2 184 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 KCT2Q8NC54 265 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 OR4K14Q8NGD5 310 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 KAT2AQ92830 837 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 PMM1Q92871 262 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 ZNF649Q9BS31 505 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 EVA1AQ9H8M9 152 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 CACYBPQ9HB71 228 aaKnown RBP23.38■■□□□ 1.33
ROM1-201ENST00000278833 C14orf119Q9NWQ9 140 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 SATB2Q9UPW6 733 aa23.38■■□□□ 1.33
ROM1-201ENST00000278833 URADA6NGE7 173 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 GNSP15586 552 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 PTBP1P26599 531 aaKnown RBP eCLIP23.37■■□□□ 1.33
ROM1-201ENST00000278833 RPS5P46782 204 aaKnown RBP23.37■■□□□ 1.33
ROM1-201ENST00000278833 EEF1A1P68104 462 aaKnown RBP23.37■■□□□ 1.33
ROM1-201ENST00000278833 BDH1Q02338 343 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 DDI2Q5TDH0 399 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 OR2G6Q5TZ20 316 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 NKAIN4Q8IVV8 208 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 PSD4Q8NDX1 1056 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 BRIX1Q8TDN6 353 aaKnown RBP23.37■■□□□ 1.33
ROM1-201ENST00000278833 RSC1A1Q92681 617 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 KXD1Q9BQD3 176 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 ZNF350Q9GZX5 532 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 MIR1-1HGQ9H1L0 117 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 ZNF232Q9UNY5 417 aa23.37■■□□□ 1.33
ROM1-201ENST00000278833 HTR3EA5X5Y0 456 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 A6NCN8 305 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 BTN3A3O00478 584 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 FRS3O43559 492 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 CPN2P22792 545 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 RFX2P48378 723 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 ZNF628Q5EBL2 1059 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 TMEM196Q5HYL7 178 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 FHL5Q5TD97 284 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 ZNF836Q6ZNA1 936 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 ARIH2OSQ8N7S6 290 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 SLC16A11Q8NCK7 471 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 OR1E3Q8WZA6 343 aa23.36■■□□□ 1.33
ROM1-201ENST00000278833 OR2A5Q96R48 311 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms