RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 C19orf53Q9UNZ5 99 aaPredicted RBP11.52□□□□□ -0.57
CD44-203ENST00000278386 DSCAMO60469 2012 aa11.52□□□□□ -0.57
CD44-203ENST00000278386 SERTM1A2A2V5 107 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 OR2M5A3KFT3 312 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 H0YC42 278 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 UPK1AO00322 258 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 UBFD1O14562 309 aaKnown RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 PDPK1O15530 556 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 FADS1O60427 444 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 RSL1D1O76021 490 aaKnown RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 KCNH1O95259 989 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 HOXB4P17483 251 aaPredicted RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 GPC1P35052 558 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 CD79BP40259 229 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 TPD52P55327 224 aaPredicted RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 RPS3AP61247 264 aaKnown RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 SLC29A2Q14542 456 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 PON3Q15166 354 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 FRMD7Q6ZUT3 714 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 IKBIPQ70UQ0 350 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 Q71RC1 249 aaPredicted RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 BTLAQ7Z6A9 289 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 MARCH3Q86UD3 253 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 OR2L13Q8N349 312 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 CEP112Q8N8E3 955 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 FAM76AQ8TAV0 307 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 GFM2Q969S9 779 aaKnown RBP11.51□□□□□ -0.57
CD44-203ENST00000278386 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 C1GALT1C1Q96EU7 318 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 AMDHD1Q96NU7 426 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 C3orf14Q9HBI5 128 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 DCDC2Q9UHG0 476 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 EMCNQ9ULC0 261 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 VDAC3Q9Y277 283 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 ZNF337Q9Y3M9 751 aa11.51□□□□□ -0.57
CD44-203ENST00000278386 RAI1Q7Z5J4 1906 aaPredicted RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 G3V2L1 256 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 LINC01387J3KSC0 135 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 UTS2O95399 124 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 PSMG1O95456 288 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 IL33O95760 270 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 FAM153BP0C7A2 387 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 FCGR2AP12318 317 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 HOXC12P31275 282 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 CCKARP32238 428 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 SUCLG1P53597 346 aaKnown RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 CLDN20P56880 219 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 NAA20P61599 178 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 NKX6-1P78426 367 aaPredicted RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 SGCBQ16585 318 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 FAM153CQ494X1 144 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 Q5PR19 223 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ANKRD26P1Q6NSI1 321 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 NOXRED1Q6NXP6 359 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ZNF550Q7Z398 422 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 P3H2Q8IVL5 708 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 FBXO30Q8TB52 745 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 FNDC9Q8TBE3 224 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 MZB1Q8WU39 189 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 PIK3R3Q92569 461 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ELP4Q96EB1 424 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ZC3HAV1LQ96H79 300 aaKnown RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 C18orf12Q96KH6 178 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 WFIKKN1Q96NZ8 548 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 CCL19Q99731 98 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 SMR3AQ99954 134 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 RHOXF2Q9BQY4 288 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 SLC39A3Q9BRY0 314 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 LMF2Q9BU23 707 aaKnown RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 PRRG4Q9BZD6 226 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 RTN4RQ9BZR6 473 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ZNF395Q9H8N7 513 aaPredicted RBP11.5□□□□□ -0.57
CD44-203ENST00000278386 PROCRQ9UNN8 238 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 FIS1Q9Y3D6 152 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ZNF175Q9Y473 711 aa11.5□□□□□ -0.57
CD44-203ENST00000278386 ARID1AO14497 2285 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 A0A1W2PPM1 405 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 GXYLT2A0PJZ3 443 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 SMIM23A6NLE4 172 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 H3BQF6 201 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 EIF1AYO14602 144 aaKnown RBP11.49□□□□□ -0.57
CD44-203ENST00000278386 ARHGEF9O43307 516 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 SMPD2O60906 423 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 SEC22BO75396 215 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 TNFRSF21O75509 655 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 ANGPTL1O95841 491 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 PROCP04070 461 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 UROSP10746 265 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 GABRA3P34903 492 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 UGT2B10P36537 528 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 KIR2DL2P43627 348 aaPredicted RBP11.49□□□□□ -0.57
CD44-203ENST00000278386 CLDN15P56746 228 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 FGFBP1Q14512 234 aa11.49□□□□□ -0.57
CD44-203ENST00000278386 EXOC3L2Q2M3D2 409 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms