RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GPA33Q99795 319 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TIMM29Q9BSF4 260 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 JAM3Q9BX67 310 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TP63Q9H3D4 680 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TPK1Q9H3S4 243 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CYP8B1Q9UNU6 501 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ENTPD4Q9Y227 616 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 IGKV1-8A0A0C4DH67 115 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 MEIOCA2RUB1 952 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 CCDC182A6NF36 153 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 CENPXA8MT69 81 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 POLR1CO15160 346 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-201ENST00000277198 EMC8O43402 210 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 CHST10O43529 356 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 GDF9O60383 454 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 HCN1O60741 890 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 PCCBP05166 539 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 CSNK2A2P19784 350 aaPredicted RBP12.08□□□□□ -0.48
C9orf3-201ENST00000277198 PRKAR1BP31321 381 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 SDC2P34741 201 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 MPIP34949 423 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 TRIM23P36406 574 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 STAT5AP42229 794 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 PPP3R1P63098 170 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 FUT5Q11128 374 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 HYAL2Q12891 473 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 SLAMF1Q13291 335 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 DSG2Q14126 1118 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.48
C9orf3-201ENST00000277198 SLC35F1Q5T1Q4 408 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 ABHD17CQ6PCB6 329 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 KIAA1324Q6UXG2 1013 aaKnown RBP12.08□□□□□ -0.48
C9orf3-201ENST00000277198 KIF18BQ86Y91 864 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 VWA5B2Q8N398 1253 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 AMER3Q8N944 861 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 OR2L5Q8NG80 312 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 MS4A6EQ96DS6 147 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 C1GALT1C1Q96EU7 318 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 KATNB1Q9BVA0 655 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 RMI1Q9H9A7 625 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 PRDM7Q9NQW5 492 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 GIMAP4Q9NUV9 329 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 KLHL28Q9NXS3 571 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
C9orf3-201ENST00000277198 CENPBD1B2RD01 187 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TMCC2O75069 709 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ALPPP05187 535 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 CSF3P09919 207 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 FPR3P25089 353 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ATP5A1P25705 553 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PKLRP30613 574 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TGM3Q08188 693 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 GPR19Q15760 415 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 DECR1Q16698 335 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZFP69Q49AA0 526 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 FLYWCH1Q4VC44 716 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 GPAT3Q53EU6 434 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZMAT1Q5H9K5 638 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF311Q5JNZ3 666 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZNF362Q5T0B9 420 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PMS2CLQ68D20 193 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 SLC48A1Q6P1K1 146 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 RRM2BQ7LG56 351 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ADCK2Q7Z695 626 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TM9SF4Q92544 642 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 DIO2Q92813 273 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ST6GAL2Q96JF0 529 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 ZC3H10Q96K80 434 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 NEDD4LQ96PU5 975 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 INSM2Q96T92 566 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 LGR4Q9BXB1 951 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 BTBD1Q9H0C5 482 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 WDR26Q9H7D7 661 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TIGARQ9NQ88 270 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PRSS16Q9NQE7 514 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TM7SF3Q9NS93 570 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 SEMA4GQ9NTN9 838 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 IL20Q9NYY1 176 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 CES1P1Q9UKY3 287 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 POLHQ9Y253 713 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 A0A1W2PR48 441 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 IGLON5A6NGN9 336 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 TTC36A6NLP5 189 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 DUXAA6NLW8 204 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 AKAP8O43823 692 aaKnown RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 AGR2O95994 175 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 HLA-DPB1P04440 258 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 OMPP47874 163 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 NKX2-5P52952 324 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-201ENST00000277198 PRKAG1P54619 331 aa12.07□□□□□ -0.48
C9orf3-201ENST00000277198 MXD1Q05195 221 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms