RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ARF3P61204 181 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 PUM1Q14671 1186 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 NKAIN4Q8IVV8 208 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 LAX1Q8IWV1 398 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 PARP16Q8N5Y8 322 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 RIT1Q92963 219 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 NECTIN4Q96NY8 510 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 CLEC4MQ9H2X3 399 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 TRIM36Q9NQ86 728 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 TMEM45AQ9NWC5 275 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 HSPE1-MOB4S4R3N1 261 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 IRGMA1A4Y4 181 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 NTN1O95631 604 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 DRD5P21918 477 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 MMP11P24347 488 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 CXCR1P25024 350 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 PPP2CBP62714 309 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 PPP2CAP67775 309 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 BCL7AQ4VC05 210 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ACSM5Q6NUN0 579 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ZNF544Q6NX49 715 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 SLC44A3Q8N4M1 653 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 MEIOBQ8N635 442 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 YIPF7Q8N8F6 280 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ATP13A2Q9NQ11 1180 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 C1GALT1Q9NS00 363 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 HSPB11Q9Y547 144 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 PRKYO43930 277 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ADH7P40394 386 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 OR1D4P47884 311 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 DHPSP49366 369 aaPredicted RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 MAZP56270 477 aaKnown RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 LSM11P83369 360 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 UBE2UQ5VVX9 321 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 TCTN3Q6NUS6 607 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 OR6N2Q8NGY6 317 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 ZNF559Q9BR84 538 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 NUFIP1Q9UHK0 495 aaKnown RBP13.7□□□□□ -0.22
CNOT9-201ENST00000273064 SLC6A14Q9UN76 642 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
CNOT9-201ENST00000273064 A8MVJ9 347 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 UPK1AO00322 258 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ELAVL4P26378 380 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 PDX1P52945 283 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 CD300CQ08708 224 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 GPR18Q14330 331 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ARHGAP40Q5TG30 622 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 MYADMQ96S97 322 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ALOXE3Q9BYJ1 711 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ERVK-19Q9WJR5 959 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SPTAN1Q13813 2472 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 LCTP09848 1927 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 C17orf113A0A1B0GUU1 675 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 LRIT2A6NDA9 550 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ANXA2P2A6NMY6 339 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ANXA2P07355 339 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 MNDAP41218 407 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 GBX2P52951 348 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ABATP80404 500 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 STEAP3Q658P3 488 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SPRYD4Q8WW59 207 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 DUS3LQ96G46 650 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 CSF3RQ99062 836 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SPATA9Q9BWV2 254 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 RBM38Q9H0Z9 239 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SEC61A2Q9H9S3 476 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 GPN2Q9H9Y4 310 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 PELI2Q9HAT8 420 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 NANSQ9NR45 359 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 MAFFQ9ULX9 164 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 UNC119BA6NIH7 251 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SCDO00767 359 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SOCS6O14544 535 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 OLFM2O95897 454 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 RPS15AP62244 130 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 RPL6Q02878 288 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 NRARPQ7Z6K4 114 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 OR13C2Q8NGS9 318 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 MRGPRX3Q96LB0 322 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 MTHFD2LQ9H903 347 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 PAQR5Q9NXK6 330 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 CCL27Q9Y4X3 112 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SLC2A10O95528 541 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 SDHBP21912 280 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 ZNF45Q02386 682 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 PUS10Q3MIT2 529 aaKnown RBP13.69□□□□□ -0.22
CNOT9-201ENST00000273064 EOGTQ5NDL2 527 aa13.69□□□□□ -0.22
CNOT9-201ENST00000273064 TUBA3EQ6PEY2 450 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms