RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 THBS2P35442 1172 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 NR4A2P43354 598 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 PLEKHN1Q494U1 663 aaPredicted RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 SERPINA11Q86U17 422 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 MS4A15Q8N5U1 240 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 SPRYD4Q8WW59 207 aaPredicted RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 RFT1Q96AA3 541 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ACPTQ9BZG2 426 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 STARD5Q9NSY2 213 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ERVK13-1Q9NX77 482 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 SLC7A7Q9UM01 511 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 MROH6A6NGR9 719 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 INMT-MINDY4F8WBC2 141 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 E2F3O00716 465 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 PRKYO43930 277 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 SRPX2O60687 465 aaPredicted RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 CRABP1P29762 137 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 MAGEA12P43365 314 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 SPHARQ15513 63 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 DCST2Q5T1A1 773 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 C3P1Q6ZMU1 363 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 KLBQ86Z14 1044 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 STUB1Q9UNE7 303 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 GKN3PP0CG01 181 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 CDK4P11802 303 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 FOXA1P55317 472 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 SNRPD2P62316 118 aaKnown RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 ZXDBP98169 803 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ZNF181Q2M3W8 571 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 RAB12Q6IQ22 244 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 GATAD2BQ8WXI9 593 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 UTP4Q969X6 686 aaKnown RBP12.53□□□□□ -0.4
SMG9-201ENST00000270066 LGALS12Q96DT0 336 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 ERVK-19Q9WJR5 959 aa12.53□□□□□ -0.4
SMG9-201ENST00000270066 OR2T1O43869 369 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 RBBP9O75884 186 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.4
SMG9-201ENST00000270066 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.4
SMG9-201ENST00000270066 CDKN2CP42773 168 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 MTNR1AP48039 350 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.4
SMG9-201ENST00000270066 ADAMTSL4Q6UY14 1074 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 GAREM2Q75VX8 874 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 TSPYL5Q86VY4 417 aaPredicted RBP12.52□□□□□ -0.4
SMG9-201ENST00000270066 ARRDC3Q96B67 414 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 CDH20Q9HBT6 801 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 THAP10Q9P2Z0 257 aaPredicted RBP12.52□□□□□ -0.4
SMG9-201ENST00000270066 RIMS3Q9UJD0 308 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 ADAM29Q9UKF5 820 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 H7C2Y5 167 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 M0R233 179 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 KIAA0355O15063 1070 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 GRPRP30550 384 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 ACVR1BP36896 505 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 FNTBP49356 437 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 DCAF7P61962 342 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 CDK10Q15131 360 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 TMEM69Q5SWH9 247 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 PRAMEF8Q5VWM4 474 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 PRAMEF7Q5VXH5 474 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 HAVCR2Q8TDQ0 301 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 MGLLQ99685 303 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 OR10A4Q9H209 315 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 KCMF1Q9P0J7 381 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 KCNIP3Q9Y2W7 256 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 TOGARAM1Q9Y4F4 1720 aa12.52□□□□□ -0.4
SMG9-201ENST00000270066 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 H3BNC9 293 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 FOXE1O00358 373 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 HIST1H1TP22492 207 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 ETV4P43268 484 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 HLCSP50747 726 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 ECH1Q13011 328 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 CDKN3Q16667 212 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 SPTSSAQ969W0 71 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 CREB3L1Q96BA8 519 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 INSM2Q96T92 566 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 ARNTLO00327 626 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 ADH7P40394 386 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 PLBD1Q6P4A8 553 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 TMEM184AQ6ZMB5 413 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 DCDC5Q6ZRR9 648 aa12.52□□□□□ -0.41
SMG9-201ENST00000270066 ABHD12BQ7Z5M8 362 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 PIAS4Q8N2W9 510 aaPredicted RBP12.52□□□□□ -0.41
SMG9-201ENST00000270066 FAM46BQ96A09 425 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms