RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ZNF443Q9Y2A4 671 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 MAU2Q9Y6X3 613 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ANKRD11Q6UB99 2663 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 KMT2BQ9UMN6 2715 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 EIF4E1BA6NMX2 242 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 BCKDKO14874 412 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 DYRK3O43781 588 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 BRINP1O60477 761 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 FCMRO60667 390 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 SEMA7AO75326 666 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 CDC123O75794 336 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 UGT2B17O75795 530 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ONECUT2O95948 504 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 MT-CO3P00414 261 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 HBQ1P09105 142 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 TRHRP34981 398 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 RORAP35398 523 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 YAP1P46937 504 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 TUBA4AP68366 448 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
COPS3-201ENST00000268717 ERV3-1Q14264 604 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 LAPTM4AQ15012 233 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ZSWIM7Q19AV6 140 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ARHGAP40Q5TG30 622 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ZNF691Q5VV52 312 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 CDCP2Q5VXM1 449 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ANKRD34AQ69YU3 496 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 WDR53Q7Z5U6 358 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 COMTD1Q86VU5 262 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 SLITRK4Q8IW52 837 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 OFCC1Q8IZS5 231 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 FBLIM1Q8WUP2 373 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 CCDC74BQ96LY2 380 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 FEVQ99581 238 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 PITX2Q99697 317 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 FUZQ9BT04 418 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 SOX17Q9H6I2 414 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 NDRG4Q9ULP0 352 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 TMCC3Q9ULS5 477 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 PCDHGA8Q9Y5G5 932 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 KIF26BQ2KJY2 2108 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 IGLV3-12A0A075B6K2 115 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 TCRBV16S1A1N1A0A5B0 115 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 NME6O75414 186 aaPredicted RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 CLIC3O95833 236 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 ADAP00813 363 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 CBLP22681 906 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 GABRA3P34903 492 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 OR1D4P47884 311 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 PSG6Q00889 435 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 RHAGQ02094 409 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 NPRL3Q12980 569 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 ZNF267Q14586 743 aaPredicted RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 GANABQ14697 944 aaKnown RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 ST3GAL2Q16842 350 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 ZNF770Q6IQ21 691 aaPredicted RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 DEF8Q6ZN54 512 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 OLIG3Q7RTU3 272 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 LACC1Q8IV20 430 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 SLC5A8Q8N695 610 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 ZNF615Q8N8J6 731 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 OR6T1Q8NGN1 323 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 VANGL1Q8TAA9 524 aaPredicted RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 PTCHD1Q96NR3 888 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 GFM1Q96RP9 751 aaKnown RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 ARMC7Q9H6L4 198 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 ZNF556Q9HAH1 456 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 PAPOLBQ9NRJ5 636 aaKnown RBP14.25□□□□□ -0.13
COPS3-201ENST00000268717 RARRES3Q9UL19 164 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 MKLN1Q9UL63 735 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 CFL2Q9Y281 166 aa14.25□□□□□ -0.13
COPS3-201ENST00000268717 TRABD2BA6NFA1 517 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 TRIM64CA6NLI5 447 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 D6RAR5 112 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 M0R3H8 397 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 ZZEF1O43149 2961 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 MITFO75030 526 aaPredicted RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 IFNA16P05015 189 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 NID1P14543 1247 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 ELAVL4P26378 380 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 IFNA8P32881 189 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 EEF1A1P68104 462 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 ELAVL1Q15717 326 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 NPTX1Q15818 432 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 RBM48Q5RL73 367 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 DCST1Q5T197 706 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 TSPYL5Q86VY4 417 aaPredicted RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 VRK2Q86Y07 508 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 ZNF786Q8N393 782 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 PLPP5Q8NEB5 264 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 TOR1AIP2Q8NFQ8 470 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 OR52J3Q8NH60 311 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 DOK4Q8TEW6 326 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 HDAC2Q92769 488 aaKnown RBP14.24□□□□□ -0.13
COPS3-201ENST00000268717 SLC35B4Q969S0 331 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 ZG16BQ96DA0 208 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 ART5Q96L15 291 aa14.24□□□□□ -0.13
COPS3-201ENST00000268717 APOL4Q9BPW4 351 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms