RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SH2D2AQ9NP31 389 aa16.84■□□□□ 0.29
SDF4-201ENST00000263741 LEF1Q9UJU2 399 aaPredicted RBP16.84■□□□□ 0.29
SDF4-201ENST00000263741 ZNF407Q9C0G0 2248 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 RP1L1Q8IWN7 2480 aaPredicted RBP16.83■□□□□ 0.28
SDF4-201ENST00000263741 A6NHS1 94 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
SDF4-201ENST00000263741 C17orf51A8MQB3 221 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 ICOSLGO75144 302 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 KCNK2O95069 426 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 OR12D1P0DN82 309 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 CYP4B1P13584 511 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 KRT20P35900 424 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 TRPC1P48995 793 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 CYP27C1Q4G0S4 372 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 SULF2Q8IWU5 870 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 ULK2Q8IYT8 1036 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 GOLM1Q8NBJ4 401 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 TMEM178AQ8NBL3 297 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 PAQR8Q8TEZ7 354 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 WDR60Q8WVS4 1066 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 SGCZQ96LD1 299 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 SLC39A3Q9BRY0 314 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 IKZF5Q9H5V7 419 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
SDF4-201ENST00000263741 CNOT11Q9UKZ1 510 aaKnown RBP16.83■□□□□ 0.28
SDF4-201ENST00000263741 NPIPA5A0A0B4J1W7 369 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 C2orf72A6NCS6 295 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 NPIPA7E9PJI5 369 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 KCNH1O95259 989 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 NPIPA8P0DM63 369 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 MEOX1P50221 254 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 RNF144AP50876 292 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 POU6F2P78424 691 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 CAPRIN1Q14444 709 aaKnown RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 DECR1Q16698 335 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 LRIF1Q5T3J3 769 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 REP15Q6BDI9 236 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 ZCCHC12Q6PEW1 402 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 DHDDSQ86SQ9 333 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 STACQ99469 402 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 PROK2Q9HC23 129 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 DUSP22Q9NRW4 184 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 SACM1LQ9NTJ5 587 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 GIN1Q9NXP7 522 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 HRH3Q9Y5N1 445 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 ZGRF1Q86YA3 2104 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 TTLL8A6PVC2 850 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 P04436 131 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 ZCCHC18P0CG32 403 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 ETFAP13804 333 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 KHKP50053 298 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 MVDP53602 400 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 FUT5Q11128 374 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 NFYCQ13952 458 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 INPP5JQ15735 1006 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 DCST2Q5T1A1 773 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 C1orf146Q5VVC0 180 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 SLC22A10Q63ZE4 541 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 DLEU7Q6UYE1 221 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 C10orf111Q8N326 155 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 SPPL2AQ8TCT8 520 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 PHF12Q96QT6 1004 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 BTBD2Q9BX70 525 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 TSPAN10Q9H1Z9 355 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 ANAPC2Q9UJX6 822 aa16.82■□□□□ 0.28
SDF4-201ENST00000263741 KLF13Q9Y2Y9 288 aaPredicted RBP16.82■□□□□ 0.28
SDF4-201ENST00000263741 DNAJC13O75165 2243 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 TRBV5-3A0A0A0MS03 114 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 HMGN4O00479 90 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 PEX1O43933 1283 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 FKBP6O75344 327 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 IL33O95760 270 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 FBXW8Q8N3Y1 598 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 XAGE5Q8WWM1 108 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 RCN3Q96D15 328 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 METTL7AQ9H8H3 244 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 NDE1Q9NXR1 346 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 SCOCQ9UIL1 159 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 MED12Q93074 2177 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 PRAMEF27A3QJZ7 478 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 CLIC1O00299 241 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 TP53I11O14683 189 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 NAGAP17050 411 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 MMEL1Q495T6 779 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 HMGN2P46Q86SG4 172 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 DND1Q8IYX4 353 aaKnown RBP16.81■□□□□ 0.28
SDF4-201ENST00000263741 OR2M7Q8NG81 312 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 MIPOL1Q8TD10 442 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 GRHL3Q8TE85 626 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 SNRNP40Q96DI7 357 aaKnown RBP16.81■□□□□ 0.28
SDF4-201ENST00000263741 FRMD6Q96NE9 622 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 ZNF184Q99676 751 aaPredicted RBP16.81■□□□□ 0.28
SDF4-201ENST00000263741 KLRF1Q9NZS2 232 aa16.81■□□□□ 0.28
SDF4-201ENST00000263741 TTC36A6NLP5 189 aa16.8■□□□□ 0.28
SDF4-201ENST00000263741 MRASO14807 208 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms