RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NXF5Q9H1B4 397 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CDH20Q9HBT6 801 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CA5BQ9Y2D0 317 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 LSM5Q9Y4Y9 91 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 M0QZQ0 153 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 GPR37L1O60883 481 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 PSMB5P28074 263 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 EEF1A2Q05639 463 aaKnown RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 AADACL4Q5VUY2 407 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 FIZ1Q96SL8 496 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 CDC6Q99741 560 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 PPIL3Q9H2H8 161 aaKnown RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 CD207Q9UJ71 328 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 OSMP13725 252 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 SLC6A11P48066 632 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 BMXP51813 675 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 DEFB103AP81534 67 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 IRF4Q15306 451 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 STK11Q15831 433 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 LMNTD1Q8N9Z9 388 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 ANKK1Q8NFD2 765 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 LPAR4Q99677 370 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 PCDHGA8Q9Y5G5 932 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 SOX9P48436 509 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 ERV3-1Q14264 604 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 LCN8Q6JVE9 175 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 OR52R1Q8NGF1 315 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 OR52E1Q8NGJ3 308 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 OR5W2Q8NH69 310 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 CASD1Q96PB1 797 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 ALG8Q9BVK2 526 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 NLKQ9UBE8 527 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 COL2A1P02458 1487 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TCHHQ07283 1943 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TRPM3Q9HCF6 1732 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 NUDT21O43809 227 aaKnown RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 S100PP25815 95 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 PRDX3P30048 256 aaKnown RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 NR0B2Q15466 257 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 FTMTQ8N4E7 242 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TOMM40LQ969M1 308 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TCEAL4Q96EI5 215 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 TSNAXQ99598 290 aaKnown RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 CRB3Q9BUF7 120 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 POTEKPQ9BYX7 375 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-201ENST00000261037 IER3IP1Q9Y5U9 82 aa11.43□□□□□ -0.58
COL8A1-201ENST00000261037 CCDC163A0A0D9SF12 145 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CREBL2O60519 120 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ERP29P30040 261 aaKnown RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CAMLGP49069 296 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 GALNT1Q10472 559 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PCGF3Q3KNV8 242 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CPOQ8IVL8 374 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 GSTO2Q9H4Y5 243 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF160Q9HCG1 818 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ERVK-19Q9WJR5 959 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 AK6Q9Y3D8 172 aaKnown RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 A0A0J9YY10 115 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 DCDC2BA2VCK2 349 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 LCKP06239 509 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 HLCSP50747 726 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ABHD17BQ5VST6 288 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CCBE1Q6UXH8 406 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ACVR1CQ8NER5 493 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 BMFQ96LC9 184 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PTRH2Q9Y3E5 179 aaKnown RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 IGKV6-21A0A0C4DH24 114 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 FAM230AA0A1W2PPH8 454 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 MYF6P23409 242 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 EPHA4P54764 986 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 FAIMQ9NVQ4 179 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 MPPED1O15442 326 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ADAP00813 363 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PVRP15151 417 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 SSTR4P31391 388 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ETV4P43268 484 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PRKXP51817 358 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 P2RY14Q15391 338 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 RNASE10Q5GAN6 216 aaKnown RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 MORN1Q5T089 497 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PDZD3Q86UT5 571 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 LILRB2Q8N423 598 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ASCC1Q8N9N2 400 aaKnown RBP11.42□□□□□ -0.58
COL8A1-201ENST00000261037 HOXD1Q9GZZ0 328 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PLEKHA3Q9HB20 300 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 PCDHA9Q9Y5H5 950 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 NUP98P52948 1817 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 TRAV27A0A087WT01 109 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 CDC14CA4D256 554 aa11.42□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF28P17035 718 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms