RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 OR8K3Q8NH51 312 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 PHOSPHO1Q8TCT1 267 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 TANKQ92844 425 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 SLC38A4Q969I6 547 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 ADOQ96SZ5 270 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 MGLLQ99685 303 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 GSDMCQ9BYG8 508 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 PRRG3Q9BZD7 231 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 LRIT1Q9P2V4 623 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF232Q9UNY5 417 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF407Q9C0G0 2248 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 A0A0A6YYD5 115 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 C2orf74A8MZ97 194 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 RPP14O95059 124 aaKnown RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 TSPAN19P0C672 248 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 IFNA8P32881 189 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 RPL3P39023 403 aaKnown RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 GCGRP47871 477 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 SLC3A1Q07837 685 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 FADDQ13158 208 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 FAM214AQ32MH5 1076 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 C10orf62Q5T681 223 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 FAM27D1Q5T7N8 215 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 FCRL6Q6DN72 434 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 MCATQ8IVS2 390 aaKnown RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 CLDN22Q8N7P3 220 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 POC5Q8NA72 575 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 OR4K13Q8NH42 304 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 NEURL3Q96EH8 262 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 LINC00615Q96LM1 132 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 TSSK2Q96PF2 358 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 GDF15Q99988 308 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 EPHX3Q9H6B9 360 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 TRIM45Q9H8W5 580 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 ING1Q9UK53 422 aaPredicted RBP8.49□□□□□ -1.05
CKAP2-201ENST00000258607 MMP17Q9ULZ9 603 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 ERGIC3Q9Y282 383 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 CHD8Q9HCK8 2581 aa8.49□□□□□ -1.05
CKAP2-201ENST00000258607 WNT1P04628 370 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CRYZQ08257 329 aaKnown RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CPOQ8IVL8 374 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PEX5LQ8IYB4 626 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 OR13F1Q8NGS4 319 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 C8orf44Q96CB5 159 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 TIMM29Q9BSF4 260 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 OR6C2Q9NZP2 312 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 MKL2Q9ULH7 1088 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 DAPP1Q9UN19 280 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 TEX51A0A1B0GUA7 166 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 EMC8O43402 210 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 UBXN7O94888 489 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ADORA3P0DMS8 318 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ANXA8P13928 327 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 RHCEP18577 417 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CD6P30203 668 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 SLC35A2P78381 396 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 FAM53BQ14153 422 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PUS10Q3MIT2 529 aaKnown RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CRTC2Q53ET0 693 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PHF19Q5T6S3 580 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 USP51Q70EK9 711 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CAMKVQ8NCB2 501 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 TBC1D15Q8TC07 691 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 OR2A5Q96R48 311 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 KLHDC3Q9BQ90 382 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 NUDT22Q9BRQ3 303 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 SLC38A1Q9H2H9 487 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ASIC5Q9NY37 505 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 POFUT2Q9Y2G5 429 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ADAM18Q9Y3Q7 739 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 TMEM184BQ9Y519 407 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CDC42EP2O14613 210 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 KIAA0513O60268 411 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 OR2B3O76000 313 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PROS1P07225 676 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 CD38P28907 300 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ARL9Q6T311 187 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 LNX2Q8N448 690 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 FAM98AQ8NCA5 519 aaKnown RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 FAM83FQ8NEG4 500 aaPredicted RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 SDR9C7Q8NEX9 313 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 RIT1Q92963 219 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 DUS3LQ96G46 650 aaKnown RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ZNF354BQ96LW1 612 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 DDX31Q9H8H2 851 aaKnown RBP8.48□□□□□ -1.05
CKAP2-201ENST00000258607 PELI2Q9HAT8 420 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 ANKRD10Q9NXR5 420 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 MUTYHQ9UIF7 546 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 GRIP1Q9Y3R0 1128 aa8.48□□□□□ -1.05
CKAP2-201ENST00000258607 SHISA8B8ZZ34 492 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 NPIPB8E9PQR5 432 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 GPANK1O95872 356 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 RECKO95980 971 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 F13BP05160 661 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 GGT2P36268 569 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 RBM48Q5RL73 367 aaKnown RBP8.47□□□□□ -1.05
CKAP2-201ENST00000258607 SAXO2Q658L1 398 aa8.47□□□□□ -1.05
CKAP2-201ENST00000258607 ABHD13Q7L211 337 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms