RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SMPDL3AQ92484 453 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 FERD3LQ96RJ6 166 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 FNDC11Q9BVV2 318 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 NIPAL2Q9H841 368 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 POLMQ9NP87 494 aaPredicted RBP15.9■□□□□ 0.14
FOXA1-201ENST00000250448 GIMAP4Q9NUV9 329 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 AHSPQ9NZD4 102 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 KLF15Q9UIH9 416 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 IRGMA1A4Y4 181 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 FAM170BA6NMN3 283 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 RTCAO00442 366 aaKnown RBP15.9■□□□□ 0.14
FOXA1-201ENST00000250448 ARHGEF9O43307 516 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 GABRA5P31644 462 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 CTAG1AP78358 180 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 CDK5Q00535 292 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 RAB40BQ12829 278 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 FAM20CQ8IXL6 584 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 ZNF687Q8N1G0 1237 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 TMEM163Q8TC26 289 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 ZBED6CLQ96FA7 236 aaPredicted RBP15.9■□□□□ 0.14
FOXA1-201ENST00000250448 SOSTQ9BQB4 213 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 SERHL2Q9H4I8 314 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 PPP1R3EQ9H7J1 279 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 MRPS18AQ9NVS2 196 aaKnown RBP15.9■□□□□ 0.14
FOXA1-201ENST00000250448 C5AR2Q9P296 337 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 VPS13AQ96RL7 3174 aa15.9■□□□□ 0.14
FOXA1-201ENST00000250448 MAN2B1O00754 1011 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TBX19O60806 448 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PRKAR1AP10644 381 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 UBL4AP11441 157 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 HNRNPA2B1P22626 353 aaKnown RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 SMSP52788 366 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 EFNB1P98172 346 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PRAMEF14Q5SWL7 426 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PRAMEF13Q5VWM6 474 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 SLC36A4Q6YBV0 504 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 RAD51AP1Q96B01 352 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TM4SF18Q96CE8 201 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 GPA33Q99795 319 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TREX2Q9BQ50 279 aaPredicted RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 B3GAT2Q9NPZ5 323 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 MAN2C1Q9NTJ4 1040 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 CASKO14936 926 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PRODHO43272 600 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 HPGDSO60760 199 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 C1QBP02746 253 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 IGHV4-34P06331 123 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 FGF9P31371 208 aaPredicted RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 RPA4Q13156 261 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 FZD5Q13467 585 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TNK1Q13470 666 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 SYPL1Q16563 259 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TYW3Q6IPR3 259 aaKnown RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 LYPD8Q6UX82 237 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 ABI3BPQ7Z7G0 1075 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 DCUN1D3Q8IWE4 304 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 KRT78Q8N1N4 520 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 NATD1Q8N6N6 113 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TSTD1Q8NFU3 115 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 OR5K2Q8NHB8 316 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 ZNF717Q9BY31 904 aaPredicted RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 USP36Q9P275 1121 aaKnown RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 EXOSC1Q9Y3B2 195 aaKnown RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 CLCA3PQ9Y6N3 262 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TDRD6O60522 2096 aaKnown RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 SPEGQ15772 3267 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TEAD1P28347 426 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 CLDN20P56880 219 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 LSM11P83369 360 aaKnown RBP eCLIP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 C19orf57Q0VDD7 668 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 P2RY14Q15391 338 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 FAM214AQ32MH5 1076 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 METAP1DQ6UB28 335 aaPredicted RBP15.89■□□□□ 0.13
FOXA1-201ENST00000250448 LINC00471Q8N535 108 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TBC1D19Q8N5T2 526 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 ZFP41Q8N8Y5 198 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TMEM145Q8NBT3 493 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 DUSP18Q8NEJ0 188 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PLA2G12AQ9BZM1 189 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TMEM168Q9H0V1 697 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 P2RX2Q9UBL9 471 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 TAC3Q9UHF0 121 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 PCDHGB7Q9Y5F8 929 aa15.89■□□□□ 0.13
FOXA1-201ENST00000250448 ARHGEF17Q96PE2 2063 aaPredicted RBP15.88■□□□□ 0.13
FOXA1-201ENST00000250448 ABCA7Q8IZY2 2146 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 PRAMEF27A3QJZ7 478 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 LYRM1O43325 122 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 FAM157BP0CG42 384 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 CD79BP40259 229 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 C1orf94Q6P1W5 598 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 CD200R1LQ6Q8B3 271 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 KIF18BQ86Y91 864 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 MORN4Q8NDC4 146 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 C7orf57Q8NEG2 295 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 EXOSC8Q96B26 276 aaKnown RBP15.88■□□□□ 0.13
FOXA1-201ENST00000250448 NLKQ9UBE8 527 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 A0A0X1KG70 313 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 FAM240BA0A1B0GVZ2 78 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 TRDV1A0A1B0GX56 115 aa15.88■□□□□ 0.13
FOXA1-201ENST00000250448 PI15O43692 258 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms