RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 WDSUB1Q8N9V3 476 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 GALNT11Q8NCW6 608 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 XAGE5Q8WWM1 108 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 TMEM45AQ9NWC5 275 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 SLC25A37Q9NYZ2 338 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 PCDHB14Q9Y5E9 798 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZGRF1Q86YA3 2104 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 NPIPA5A0A0B4J1W7 369 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 A0A1W2PP18 115 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 NPIPA7E9PJI5 369 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 SCO2O43819 266 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 FCMRO60667 390 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 ANP32DO95626 131 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 NPIPA8P0DM63 369 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 KLF10Q13118 480 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 TBCELQ5QJ74 424 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 DCST2Q5T1A1 773 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 TIGD3Q6B0B8 471 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 ANGPTL8Q6UXH0 198 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 SPATA21Q7Z572 469 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 FGD2Q7Z6J4 655 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 RETREG3Q86VR2 466 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 CHERPQ8IWX8 916 aaKnown RBP13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 GPR137Q96N19 417 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 SDF2Q99470 211 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 OSBPL11Q9BXB4 747 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
SUPT4H1-201ENST00000225504 RP1L1Q8IWN7 2480 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 PCNX3Q9H6A9 2034 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 A0A096LPI6 279 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ANKUB1A6NFN9 424 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 HMGN4O00479 90 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 KRT16P08779 473 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 FREM3P0C091 2139 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 EVI2BP34910 448 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 FUT5Q11128 374 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 SNTA1Q13424 505 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 CPLX4Q7Z7G2 160 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 SLC22A16Q86VW1 577 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 TRIML2Q8N7C3 387 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ST6GALNAC3Q8NDV1 305 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 DUSP19Q8WTR2 217 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 TMEM41AQ96HV5 264 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZNF597Q96LX8 424 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ZDHHC11Q9H8X9 412 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 TPT1P8Q9HAU6 139 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 ARMCX1Q9P291 453 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 BOKQ9UMX3 212 aaPredicted RBP13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 LIPGQ9Y5X9 500 aa13.15□□□□□ -0.3
SUPT4H1-201ENST00000225504 DUXAA6NLW8 204 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 FBP2O00757 339 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 SNX3O60493 162 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 WISP1O95388 367 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 OXSR1O95747 527 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 SNRPB2P08579 225 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 TBXA2RP21731 343 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 MASP1P48740 699 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 SLC10A1Q14973 349 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 ARHGAP11BQ3KRB8 267 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 KRTCAP3Q53RY4 240 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 LRIF1Q5T3J3 769 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 FAM109AQ8N4B1 249 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 GATSQ8NAP1 163 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 CHDHQ8NE62 594 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 OR1J4Q8NGS1 313 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 ZNF703Q9H7S9 590 aaPredicted RBP13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 VAPAQ9P0L0 249 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 KCNE5Q9UJ90 142 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 FBXL2Q9UKC9 423 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 PCDHGB3Q9Y5G1 929 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 WIF1Q9Y5W5 379 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 ZNF407Q9C0G0 2248 aa13.14□□□□□ -0.31
SUPT4H1-201ENST00000225504 TRBV5-3A0A0A0MS03 114 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 LOC100653049A0A140TA62 436 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 A0A1B0GTH9 108 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 NPIPB9F8W1W9 429 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 CLIC1O00299 241 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 SNPHO15079 494 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 KRT34O76011 436 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 ETFAP13804 333 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 GDF1P27539 372 aa13.13□□□□□ -0.31
SUPT4H1-201ENST00000225504 STX5Q13190 355 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms