RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CCBE1Q6UXH8 406 aaPredicted RBP17.77■□□□□ 0.43
MBD3-201ENST00000156825 DCP2Q8IU60 420 aaKnown RBP17.77■□□□□ 0.43
MBD3-201ENST00000156825 SUN5Q8TC36 379 aa17.77■□□□□ 0.43
MBD3-201ENST00000156825 CPNE2Q96FN4 548 aaPredicted RBP17.77■□□□□ 0.43
MBD3-201ENST00000156825 SOBPA7XYQ1 873 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 LCN1P31025 176 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 PRLHRP49683 370 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 GOLM1Q8NBJ4 401 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 NEDD4LQ96PU5 975 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 OR5B2Q96R09 309 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 RTP3Q9BQQ7 232 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 FBRSQ9HAH7 460 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 NUMBLQ9Y6R0 609 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 J3KTA2 159 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 SLC19A2O60779 497 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 PVALBP20472 110 aaPredicted RBP17.76■□□□□ 0.43
MBD3-201ENST00000156825 DRD5P21918 477 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 HIST1H1TP22492 207 aaPredicted RBP17.76■□□□□ 0.43
MBD3-201ENST00000156825 CXCL12P48061 93 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 NFATC3Q12968 1075 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 XKRXQ6PP77 449 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 VRK2Q86Y07 508 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 SPNS2Q8IVW8 549 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 C7orf34Q96L11 122 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 RDH8Q9NYR8 311 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 ZNF226Q9NYT6 803 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 ABCG2Q9UNQ0 655 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 LAS2Q8IYD9 372 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 E2F3O00716 465 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 RAD51DO75771 328 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 LRIF1Q5T3J3 769 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 TMIEQ8NEW7 156 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 KHSRPQ92945 711 aaKnown RBP eCLIP17.76■□□□□ 0.43
MBD3-201ENST00000156825 CDCA3Q99618 268 aaPredicted RBP17.76■□□□□ 0.43
MBD3-201ENST00000156825 NUP50Q9UKX7 468 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 TVP23AA6NH52 213 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 RGS9O75916 674 aaPredicted RBP17.76■□□□□ 0.43
MBD3-201ENST00000156825 F11P03951 625 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 GSTM2P28161 218 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 MAT1AQ00266 395 aaKnown RBP17.76■□□□□ 0.43
MBD3-201ENST00000156825 GK3PQ14409 553 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 KIR2DS3Q14952 304 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 ARRDC3Q96B67 414 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 SYNPO2LQ9H987 977 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 NLKQ9UBE8 527 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 ENTPD2Q9Y5L3 495 aa17.76■□□□□ 0.43
MBD3-201ENST00000156825 ISPDA4D126 451 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 NDUFB2O95178 105 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 RBMS1P29558 406 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 PCGF2P35227 344 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 IRS1P35568 1242 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 CCDC58Q4VC31 144 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 Q6ZPB1 254 aaPredicted RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 ELP5Q8TE02 316 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 GTF2H4Q92759 462 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 QRSL1Q9H0R6 528 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 C2orf42Q9NWW7 574 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 LRIT1Q9P2V4 623 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 TEX13CA0A0J9YWL9 993 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 A0A1B0GVC2 190 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 A6NIN4 97 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 SLC33A1O00400 549 aaPredicted RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 CSNK1EP49674 416 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 ACTA2P62736 377 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 ERVK-25P63136 954 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 ACTG2P63267 376 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 CDK10Q15131 360 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 CPZQ66K79 652 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 KCTD11Q693B1 232 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 VRK3Q8IV63 474 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 ZNF440Q8IYI8 595 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 TMEM239Q8WW34 195 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 FANCFQ9NPI8 374 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 PTRH2Q9Y3E5 179 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 TPRP12270 2363 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 DCDC2BA2VCK2 349 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 RAB15P59190 212 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 TMEM184AQ6ZMB5 413 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 TRAV27A0A087WT01 109 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 CD3GP09693 182 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 ENDOUP21128 410 aaKnown RBP17.75■□□□□ 0.43
MBD3-201ENST00000156825 PSMB10P40306 273 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 HSD11B2P80365 405 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 PRSS48Q7RTY5 328 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 ZNF442Q9H7R0 627 aa17.75■□□□□ 0.43
MBD3-201ENST00000156825 FAM71F1Q96KD3 344 aaPredicted RBP17.74■□□□□ 0.43
MBD3-201ENST00000156825 BOLA2-SMG1P6H3BVE0 249 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 RAB3BP20337 219 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 PGFP49763 221 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 LEXMQ3ZCV2 418 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 CDKL4Q5MAI5 379 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 RETREG3Q86VR2 466 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 OR10A4Q9H209 315 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 OR6C2Q9NZP2 312 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 ZNF850A8MQ14 1090 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 SYPP08247 313 aa17.74■□□□□ 0.43
MBD3-201ENST00000156825 AMY2BP19961 511 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms