RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RBFOX1Q9NWB1 397 aaKnown RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 SARDHQ9UL12 918 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 POLR1DQ9Y2S0 133 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 CHP2O43745 196 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 KRT33AO76009 404 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 LDOC1O95751 146 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 ZNF8P17098 575 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 JUNBP17275 347 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 CBLP22681 906 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 TGM1P22735 817 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 ITPKBP27987 946 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 CNR2P34972 360 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 CTSOP43234 321 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 CDC20Q12834 499 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 AQP6Q13520 282 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 KEAP1Q14145 624 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 SLC14A2Q15849 920 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 HSDL2Q6YN16 418 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 SLC39A11Q8N1S5 342 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 KCT2Q8NC54 265 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 OR8S1Q8NH09 359 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 ACOT12Q8WYK0 555 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 SGCDQ92629 289 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 FBXW5Q969U6 566 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 SAMD11Q96NU1 681 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 RAB11FIP5Q9BXF6 653 aa11.47□□□□□ -0.57
TSPAN9-201ENST00000011898 PRODHO43272 600 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 ACPPP15309 386 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 S100A10P60903 97 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 UGT3A2Q3SY77 523 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 C2orf27AQ580R0 203 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 NKAPLQ5M9Q1 402 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 CPZQ66K79 652 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 RPTNQ6XPR3 784 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 OAFQ86UD1 273 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 B3GNT4Q9C0J1 378 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 ELL3Q9HB65 397 aaPredicted RBP11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 ENPP4Q9Y6X5 453 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 KNTC1P50748 2209 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 SPTA1P02549 2419 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 EDDM13A0A1B0GTR0 161 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 A0A1B0GV50 99 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 CDK2AP1O14519 115 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 SDC3O75056 442 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 UBXN7O94888 489 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 IFNA10P01566 189 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 IFNA4P05014 189 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 GIMD1P0DJR0 217 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 PTNP21246 168 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 HRH2P25021 359 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 C14orf28Q4W4Y0 310 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 OR4Q3Q8NH05 313 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 ZDHHC12Q96GR4 267 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 LRIG1Q96JA1 1093 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 C10orf90Q96M02 699 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 SEC22CQ9BRL7 303 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 DNTTIP1Q9H147 329 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 MARCH5Q9NX47 278 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 LHX3Q9UBR4 397 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 SH2B3Q9UQQ2 575 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.57
TSPAN9-201ENST00000011898 GABRR3A8MPY1 467 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 J3QLW9 94 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 FXYD1O00168 92 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 PRAMEF2O60811 474 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 PRAMEF12O95522 483 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 WDPCPO95876 746 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 CD3GP09693 182 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 SPNP16150 400 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ZNF19P17023 458 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 TGFBR1P36897 503 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 GBX2P52951 348 aaPredicted RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 SOWAHCQ53LP3 525 aaPredicted RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ZNF691Q5VV52 312 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 TBPL2Q6SJ96 375 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 PRSS42Q7Z5A4 293 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 LKAAEAR1Q8TD35 194 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ST7LQ8TDW4 575 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ASB11Q8WXH4 323 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ZNF689Q96CS4 500 aaPredicted RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 AKIP1Q9NQ31 210 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 GSKIPQ9P0R6 139 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 H3BQ06 376 aaPredicted RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 SCN2BO60939 215 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 ARL6IP5O75915 188 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 RAB36O95755 333 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 RHOP08100 348 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 CERS1P27544 350 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 OC90Q02509 493 aaPredicted RBP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 GRHL2Q6ISB3 625 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 NXPE4Q6UWF7 544 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 FAM86B1Q8N7N1 296 aa11.46□□□□□ -0.58
TSPAN9-201ENST00000011898 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms