RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 HNRNPA0Q13151 305 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LAPTM4AQ15012 233 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ARSHQ5FYA8 562 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 DND1Q8IYX4 353 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RCBTB1Q8NDN9 531 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR5AK2Q8NH90 309 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 BIRC7Q96CA5 298 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 P2RX7Q99572 595 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 YTHDF2Q9Y5A9 579 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 BCAS1O75363 584 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 DFFBO76075 338 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CTXN2P0C2S0 81 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RABIFP47224 123 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 MAP2K6P52564 334 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TBCEQ15813 527 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SEZ6Q53EL9 994 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PLAG1Q6DJT9 500 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF695Q8IW36 515 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR4M1Q8NGD0 313 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 NT5C3BQ969T7 300 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PRAP1Q96NZ9 151 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PINK1Q9BXM7 581 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 FBXL4Q9UKA2 621 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 J3QLW9 94 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 PCDH17O14917 1159 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF19P17023 458 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 ACRV1P26436 265 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 HTR2BP41595 481 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 KCNJ5P48544 419 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 HNRNPKP61978 463 aaKnown RBP eCLIP5.77□□□□□ -1.481e-6■■■■□ 23.8
VPS13D-201ENST00000011700 MC1RQ01726 317 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 NFATC2Q13469 925 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 PDLIM3Q53GG5 364 aaPredicted RBP5.77□□□□□ -1.48
VPS13D-201ENST00000011700 CXCL17Q6UXB2 119 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 RNF130Q86XS8 419 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 OR6F1Q8NGZ6 308 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 KREMEN1Q96MU8 473 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 STRA6Q9BX79 667 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 NCDNQ9UBB6 729 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF337Q9Y3M9 751 aa5.77□□□□□ -1.48
VPS13D-201ENST00000011700 A6NHS1 94 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ONECUT3O60422 494 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MARCKSL1P49006 195 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HK3P52790 923 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MAXP61244 160 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 H3F3AP84243 136 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ECH1Q13011 328 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CATR1Q13166 79 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PCBP2Q15366 365 aaKnown RBP eCLIP5.77□□□□□ -1.493e-9■■■□□ 17.8
VPS13D-201ENST00000011700 TMPRSS12Q86WS5 348 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 OR8S1Q8NH09 359 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ARMC5Q96C12 935 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MED18Q9BUE0 208 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 RRAGCQ9HB90 399 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SMCO4Q9NRQ5 59 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF701Q9NV72 531 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 BLOC1S5-TXNDC5H3BN57 136 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 S1PR4O95977 384 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 C1GALT1C1LP0DN25 315 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ARSBP15848 533 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ZNF74Q16587 644 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HIST2H3PS2Q5TEC6 136 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FAM69BQ5VUD6 431 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TRMT10BQ6PF06 316 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SAMD7Q7Z3H4 446 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MFSD6LQ8IWD5 586 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KLHDC1Q8N7A1 406 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GPR150Q8NGU9 434 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 IP6K3Q96PC2 410 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TEX10Q9NXF1 929 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FBXL3Q9UKT7 428 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ACSL6Q9UKU0 697 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GREB1Q4ZG55 1949 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CLDN24A6NM45 220 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GABARAPH6UMI1 98 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MANBAO00462 879 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SCAMP1O15126 338 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CLN5O75503 358 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 JTBO76095 146 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 GABARAPO95166 117 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 MAKP20794 623 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 ADCYAP1R1P41586 468 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 UBE2G2P60604 165 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PMS2P3Q13401 168 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CYP27C1Q4G0S4 372 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HENMT1Q5T8I9 393 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CHADLQ6NUI6 762 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 KCTD9Q7L273 389 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 CEACAM19Q7Z692 300 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 TMEM135Q86UB9 458 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 PHOSPHO1Q8TCT1 267 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 DDX1Q92499 740 aaKnown RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FCRL3Q96P31 734 aaPredicted RBP5.77□□□□□ -1.49
VPS13D-201ENST00000011700 HCAR1Q9BXC0 346 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 SCPEP1Q9HB40 452 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 FAM118AQ9NWS6 357 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 STEAP1Q9UHE8 339 aa5.77□□□□□ -1.49
VPS13D-201ENST00000011700 POLHQ9Y253 713 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms