RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
USH1C-201ENST00000005226 SLC13A4Q9UKG4 626 aa13.13□□□□□ -0.31
USH1C-201ENST00000005226 A0A0A6YYD5 115 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 HIDE1A8MVS5 230 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MAN2B1O00754 1011 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 TBX19O60806 448 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 NOS1APO75052 506 aaPredicted RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 PCCBP05166 539 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MC3RP41968 323 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 REEP5Q00765 189 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 C19orf57Q0VDD7 668 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ADAM15Q13444 863 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 DSG2Q14126 1118 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 TRAM2Q15035 370 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 TCEA2Q15560 299 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 C9orf62Q8N4C0 152 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 DIO2Q92813 273 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 OR7D2Q96RA2 312 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 TTTY10Q9BZA0 68 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 BEX1Q9HBH7 125 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 DOCK9Q9BZ29 2069 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 NOTCH4Q99466 2003 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 A0A0B4J203 849 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 CXorf51AA0A1B0GTR3 108 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ERI3O43414 337 aaKnown RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 MRPL3P09001 348 aaKnown RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 EPHA5P54756 1037 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ARL9Q6T311 187 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MRGPREQ86SM8 312 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 SYT9Q86SS6 491 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 OR6C4Q8NGE1 309 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 OR9A2Q8NGT5 310 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 PIGXQ8TBF5 258 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MS4A3Q96HJ5 214 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 ABHD1Q96SE0 405 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 MKRN2Q9H000 416 aaKnown RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 UCKL1Q9NWZ5 548 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 COQ3Q9NZJ6 369 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 H2AFY2Q9P0M6 372 aaPredicted RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 ZNF624Q9P2J8 865 aaPredicted RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 RASD1Q9Y272 281 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 NCKAP1Q9Y2A7 1128 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 C17orf113A0A1B0GUU1 675 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 LRIT2A6NDA9 550 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 LEUTXA8MZ59 168 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 RNF13O43567 381 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 NTSP30990 170 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 IFNA8P32881 189 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 AGERQ15109 404 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 C6orf132Q5T0Z8 1188 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 BEST4Q8NFU0 473 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 OR11H4Q8NGC9 324 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 FERD3LQ96RJ6 166 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MENTQ9BUN1 341 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 PINK1Q9BXM7 581 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 PELI2Q9HAT8 420 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 NUDT15Q9NV35 164 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MOSPD1Q9UJG1 213 aa13.12□□□□□ -0.31
USH1C-201ENST00000005226 MRPS7Q9Y2R9 242 aaKnown RBP13.12□□□□□ -0.31
USH1C-201ENST00000005226 SGK494L7N484 410 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CHP2O43745 196 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 ADRB3P13945 408 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 LAG3P18627 525 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 CXCL3P19876 107 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 PDX1P52945 283 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 SLC16A1P53985 500 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 SNRPNP63162 240 aaKnown RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 E2F1Q01094 437 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 SLC3A1Q07837 685 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 TGM3Q08188 693 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 DHCR24Q15392 516 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 PGGHGQ32M88 737 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 FNDC3BQ53EP0 1204 aaKnown RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 RPTNQ6XPR3 784 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 GDF7Q7Z4P5 450 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 KIAA0907Q7Z7F0 614 aaPredicted RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 OR11H7Q8NGC8 314 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 OR5K2Q8NHB8 316 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
USH1C-201ENST00000005226 MCHR1Q99705 422 aa13.11□□□□□ -0.31
USH1C-201ENST00000005226 TIMP4Q99727 224 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms