RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ly6g5cQ8K1T5 149 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Utp4Q8R2N2 686 aaKnown RBP19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc22a30Q96LX3 552 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Twist2Q9D030 160 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Q9D3J9 298 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Jag2Q9QYE5 1247 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Syt11Q9R0N3 430 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mpeg1A1L314 713 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm6710A2ART0 554 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Serpinb9cI7HJI5 387 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Fbxw15L7N1X6 466 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 FesP16879 822 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Abcb1aP21447 1276 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tacr1P30548 407 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Egfbp2P36368 261 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prox1P48437 737 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rit1P70426 219 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vipr1P97751 459 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lpar5Q149R9 372 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Defb41Q30KP6 65 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nhlrc4Q3UP44 136 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr591Q7TRR7 314 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Reep1Q8BGH4 201 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Phf11aQ8BVM9 293 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ugt2a3Q8BWQ1 534 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cnot3Q8K0V4 751 aaKnown RBP19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lrrc61Q8R2R5 259 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ska1Q9CPV1 254 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zdhhc21Q9D270 265 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ribc2Q9D4Q1 309 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Bbs10Q9DBI2 713 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Clec3aQ9EPW4 196 aa19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 HnrnpdlQ9Z130 301 aaKnown RBP19.75■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tns1E9Q0S6 1888 aaKnown RBP19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm3285A0A1W2P7U0 201 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr1006A2ALD2 312 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 TagapB2RWW0 714 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gabrr3B2RXA8 464 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Amd2D3Z6H8 334 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp97E9PZP6 546 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Omt2aF6ZJR3 104 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vmn1r175K7N6T9 304 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp960L7N267 546 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Amd1P0DMN7 334 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Thbs1P35441 1170 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Stt3aP46978 705 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 ApodP51910 189 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Jak1P52332 1153 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Dnaja1P63037 397 aaKnown RBP19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 HpcaP84075 193 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm10644Q3TZG3 87 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Kcnh1Q60603 989 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr140Q60878 302 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prkg2Q61410 762 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc25a23Q6GQS1 467 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Fastkd3Q8BSN9 661 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rnf8Q8VC56 488 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cbr4Q91VT4 236 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Sucnr1Q99MT6 317 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tnfrsf12aQ9CR75 129 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Srxn1Q9D975 136 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nudt22Q9DD16 308 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mmp19Q9JHI0 527 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Phc2Q9QWH1 850 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cyp11a1Q9QZ82 526 aa19.74■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 H60cB1B213 197 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm8180E9PXN0 145 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lrrc23O35125 340 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nfkbil1O88995 381 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gsta2P10648 222 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cdh26P59862 763 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 CiartQ3TQ03 375 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mrm3Q5ND52 418 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Znf503Q7TMA2 652 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Pum2Q80U58 1066 aaKnown RBP19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Dpep2Q8C255 478 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rbm4Q8C7Q4 361 aaKnown RBP19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ffar2Q8VCK6 330 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rbm4bQ8VE92 357 aaKnown RBP19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr97Q8VFE1 310 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr229Q8VFN5 307 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr1233Q8VGN0 305 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lrrc49Q91YK0 686 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp810Q99K45 461 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tcf19Q99KJ5 263 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 4930553M12RikQ9CUH1 165 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rcc1lQ9CYF5 461 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ccdc77Q9CZH8 489 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Dnase1l1Q9D7J6 314 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 NplQ9DCJ9 320 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Aldh6a1Q9EQ20 535 aaKnown RBP19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr971Q9EQ96 307 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nrip2Q9JHR9 270 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prl3c1Q9QUN5 212 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Adam26aQ9R158 697 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm5565A0A0G2JGB2 317 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cldn34aG3UW52 211 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Map2k3O09110 347 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gpld1O70362 837 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp37P17141 594 aa19.73■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms