RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 PtprsB0V2N1 1907 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cd300cA2A7V7 229 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Col9a3A2ACT7 680 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 LexmA2AVQ5 414 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 E9Q0B3 247 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Vmn1r168K7N6B6 309 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 KeraO35367 351 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 CatP24270 527 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Fgf1P61148 155 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Fbxo40P62932 710 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Sox14Q04892 240 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Acss3Q14DH7 682 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Polr2mQ6P6I6 366 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cramp1Q6PG95 1285 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cst13Q80ZN5 141 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Hyal5Q812F3 526 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Slc15a3Q8BPX9 578 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Rnf222Q8CEF8 211 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Tma7Q8K003 64 aaKnown RBP17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Olfr166Q8VGX2 312 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Fam3cQ91VU0 227 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Nphs2Q91X05 385 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Qrsl1Q9CZN8 525 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cyc1Q9D0M3 325 aaKnown RBP17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Creb3l4Q9D2A5 370 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Tmem269Q9D4Y8 254 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Med27Q9DB40 311 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 ReckQ9Z0J1 971 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Plxnd1Q3UH93 1925 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Rex2A2AWF2 685 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Gm436B1AVU6 407 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Kctd17E0CYQ0 296 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Vmn2r18E9Q280 788 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Prdx1P35700 199 aaKnown RBP17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 ArntP53762 791 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Arhgef9Q3UTH8 516 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Sema3bQ62177 748 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Prr14Q7TPN9 612 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Ptges2Q8BWM0 384 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Acat2Q8CAY6 397 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Ccm2Q8K2Y9 453 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Padi6Q8K3V4 682 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Vmn1r87Q8R255 295 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Blzf1Q8R2X8 403 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Q8R3C1 574 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Olfr382Q8VF79 312 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Hdac8Q8VH37 377 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Asb18Q8VHA6 467 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 ItpaQ9D892 198 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Eif3fQ9DCH4 361 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cbll1Q9JIY2 491 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Myo15bI7HPW8 3033 aa17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Tet2Q4JK59 1912 aaKnown RBP17.22■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cd163l1A0A1B0GSB0 991 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Ndor1A2AI05 598 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Zfp40B1B1D3 796 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 2610021A01RikE9Q0Q3 834 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Rgs5O08850 181 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Pld3O35405 488 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Mtnd5P03921 607 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Tk1P04184 233 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 TP20293 436 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Ffar1Q76JU9 300 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Poldip3Q8BG81 420 aaKnown RBP17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Pi15Q8BS03 258 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Cox10Q8CFY5 443 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Gtpbp3Q923K4 492 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Trappc5Q9CQA1 188 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 CenpnQ9CZW2 337 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Zfp84Q9D654 559 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Stub1Q9WUD1 304 aa17.21■□□□□ 0.35
Trim47-202ENSMUST00000106441 Vmn2r93L7N1Z9 857 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Slc22a1O08966 556 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Rpl7P14148 270 aaKnown RBP17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Csn1s1P19228 313 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 GlaP51569 419 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Sult2a1P52843 285 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 HccsP53702 272 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Atxn1P54254 791 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Lhx1P63006 406 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 FhP97807 507 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Klhl21Q3U410 597 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Cd53Q61451 219 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Sqstm1Q64337 442 aaKnown RBP17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Arhgap22Q8BL80 702 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Slc25a24Q8BMD8 475 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Wdfy2Q8BUB4 400 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Ugt2a3Q8BWQ1 534 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 SprnQ8BWU1 147 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 St7lQ8K4P7 559 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Tmem45bQ8VCZ2 278 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Olfr1414Q8VGU5 312 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Tmem159Q922Z1 161 aa17.21■□□□□ 0.34
Trim47-202ENSMUST00000106441 Rai1Q61818 1889 aa17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Rpl7a-ps3A0A140T8L1 270 aa17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Xlr5aA2BI45 236 aa17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Rps26P62855 115 aaKnown RBP17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Mat2aQ3THS6 395 aaKnown RBP17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Pde12Q3TIU4 608 aa17.2■□□□□ 0.34
Trim47-202ENSMUST00000106441 Gm5113Q3UGK8 141 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms