RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm17615E9Q9P2 165 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Prl4a1O35256 227 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cdk5r2O35926 369 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cox5bP19536 128 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Kcnab2P62482 367 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Six5P70178 719 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Zdhhc11Q14AK4 347 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gpat2Q14DK4 801 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Trappc13Q3TIR1 417 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Zc3hav1Q3UPF5 946 aaKnown RBP21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Wdr20Q3UWE6 569 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ripk1Q60855 656 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Awat2Q6E1M8 333 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vac14Q80WQ2 782 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slc25a40Q8BGP6 337 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gin1Q8K259 518 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Wfikkn1Q8R0S6 552 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Dtx2Q8R3P2 619 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr691Q8VGW5 322 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Akr1c21Q91WR5 323 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mrgpra7Q91ZC5 305 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Acss1Q99NB1 682 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Trim16Q99PP9 556 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Zswim7Q9CWQ2 152 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Shmt2Q9CZN7 504 aaKnown RBP21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ifi30Q9ESY9 248 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 CrebbpP45481 2441 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Golga4Q91VW5 2238 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Myo15aQ9QZZ4 3511 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 FkbplO35450 347 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ulk1O70405 1051 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gria1P23818 907 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Hdac2P70288 488 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Itgb2lQ3UV74 738 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slc47a2Q3V050 573 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Dag1Q62165 893 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Timd4Q6U7R4 343 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fgl1Q71KU9 314 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1231Q7TQZ8 313 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Crls1Q80ZM8 303 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Peli2Q8BST6 419 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Timmdc1Q8BUY5 285 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gpr157Q8C206 330 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Prokr2Q8K458 381 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Znf768Q8R0T2 568 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ccdc80Q8R2G6 949 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pla2g15Q8VEB4 412 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1378Q8VGH0 315 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Atp6v1b1Q91YH6 513 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nkx6-1Q99MA9 365 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Adck1Q9D0L4 525 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Chp2Q9D869 196 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mmp19Q9JHI0 527 aa21.16■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gm7682A0A0J9YUM1 481 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fam84bD3YXJ5 310 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Zfp619G3X9T2 1161 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Lrrc23O35125 340 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 OtcP11725 354 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Rps26P62855 115 aaKnown RBP21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Magee2Q52KG3 523 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 WhammQ571B6 793 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Serinc5Q8BHJ6 461 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Dpep2Q8C255 478 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 1700001C19RikQ8K168 210 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Galnt18Q8K1B9 622 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 BroxQ8K2Q7 411 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gstm4Q8R5I6 218 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1467Q8VFW1 308 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Satb2Q8VI24 733 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pink1Q99MQ3 580 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Hnrnpa0Q9CX86 305 aaKnown RBP21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Toe1Q9D2E2 511 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Srxn1Q9D975 136 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fbxw5Q9QXW2 573 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tmeff2Q9QYM9 374 aa21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cnot1Q6ZQ08 2375 aaKnown RBP21.15■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gm14399A2ARW8 610 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr601A2RS33 314 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gm8267E9Q207 261 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Galr3O88853 370 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nudt19P11930 357 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slc2a2P14246 523 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1308Q7TQX0 320 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr591Q7TRR7 314 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Trim69Q80X56 500 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fem1abQ8C0T1 654 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Q8C0X8 640 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ly6g5cQ8K1T5 149 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 HscbQ8K3A0 234 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Casc3Q8K3W3 698 aaKnown RBP21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Crb3Q8QZT4 113 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Acp1Q9D358 158 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sh3glb1Q9JK48 365 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mmp17Q9R0S3 578 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sema6cQ9WTM3 931 aa21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 PrkraQ9WTX2 313 aaKnown RBP21.14■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gvin1Q80SU7 2427 aa21.14■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Ighg2cF6TQW2 404 aa21.14■□□□□ 0.97
Scn1b-201ENSMUST00000098548 Rhox13F6YCR7 232 aa21.14■□□□□ 0.97
Scn1b-201ENSMUST00000098548 P01864 335 aa21.14■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms