RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Alox8O35936 677 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 GcgP55095 180 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 BidP70444 195 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Bmp3Q8BHE5 468 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tprg1lQ9DBS2 266 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sgk2Q9QZS5 367 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Spint1Q9R097 507 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sema4fQ9Z123 777 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nr4a2Q06219 598 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ticam1Q80UF7 732 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Chpt1Q8C025 398 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pdcd2lQ8C5N5 364 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sdhaf2Q8C6I2 164 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Il17rcQ8K4C2 698 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Med9Q8VCS6 142 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fndc8Q9D2H8 321 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zswim2Q9D9X6 631 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm11127A7VMS2 374 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn2r103E9PWW0 856 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr610E9Q598 315 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm597E9Q8J5 896 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Lsm5P62322 91 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 HrQ61645 1182 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Znf410Q8BKX7 478 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Steap1Q9CWR7 339 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hint2Q9D0S9 163 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cpne8Q9DC53 577 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr221B2RVX8 311 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr723E9PZU2 309 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rdh5O55240 318 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rab5cP35278 216 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tap2P36371 702 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gpr119Q7TQP3 335 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hs6st2Q80UW0 612 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc35d3Q8BGF8 422 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 NagpaQ8BJ48 517 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Lix1lQ8BQ89 337 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mettl22Q8R1C6 393 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pla1aQ8VI78 456 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pcyt2Q922E4 404 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cxxc1Q9CWW7 660 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cntn6Q9JMB8 1028 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hsf4Q9R0L1 492 aa11.38□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr631F8VPJ9 319 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pot1bH7BX60 640 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dsc1P55849 886 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rpl35Q6ZWV7 123 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ttc34Q8C0Q3 554 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Smco4Q9JIS3 59 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zc3h8Q9JJ48 305 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rfx5Q9JL61 658 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Loxl3Q9Z175 754 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Acbd4E9Q289 327 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Znf683I7HJS4 458 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc26a1P58735 704 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Has2P70312 552 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cry1P97784 606 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 GaltQ03249 379 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 HgsnatQ3UDW8 656 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cnpy1Q4VAB4 94 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Csnk2a1Q60737 391 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tbl1xr1Q8BHJ5 514 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc5a11Q8K0E3 673 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn1r205Q8R276 316 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 L2hgdhQ91YP0 464 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc41a3Q921R8 488 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Txnrd3Q99MD6 652 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc39a5Q9D856 535 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Plek2Q9WV52 353 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm29106A0A087WSP8 697 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 IghdA0A0A6YW14 291 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr566A0A1B0GST0 319 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm20390E9PZF0 267 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nmur1O55040 428 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc6a18O88576 615 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nat1P50294 290 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Snrpd2P62317 118 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cdk2P97377 346 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nkx3-2P97503 333 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ccdc190Q3URK1 288 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 HepacamQ640R3 418 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sec14l4Q8R0F9 403 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cuedc1Q8R3V6 388 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr846Q8VET8 312 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rad51cQ924H5 366 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 PclafQ9CQX4 110 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 MmabQ9D273 237 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr74A2BHP6 318 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm10720D3Z1I5 223 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gstp3F6RWR5 210 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hsd3b6O35469 373 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mtco2P00405 227 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 PgfP49764 158 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Garem2Q6PAJ3 880 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tas2r135Q7TQA9 312 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr298Q7TS06 332 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fam78aQ8C552 283 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 MmaaQ8C7H1 415 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfyve21Q8VCM3 234 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr357Q8VFP4 308 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms