RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Plet1Q8VEN2 237 aa9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc25a30Q9CR58 291 aa9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 SdhcQ9CZB0 169 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pole3Q9JKP7 145 aa9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Habp4Q9JKS5 411 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tbl2Q9R099 442 aaKnown RBP9.23□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 MgamB5THE2 1827 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PrnpP04925 254 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Inpp5jP59644 1003 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gal3st3P61315 431 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tbx1P70323 479 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Dppa5bP85965 119 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 SmsP97355 366 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Plpp4Q0VBU9 271 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fut4Q11127 433 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ToxQ66JW3 526 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Acat3Q80X81 397 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rspo2Q8BFU0 243 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fam109aQ8BH49 266 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc25a12Q8BH59 677 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Yipf6Q8BR70 236 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Trmt10aQ8C1Z8 328 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rpp25Q91WE3 199 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rwdd2bQ99M03 290 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ndufs4Q9CXZ1 175 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cbll1Q9JIY2 491 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tinf2Q9QXG9 341 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn2r18E9Q280 788 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfp949E9Q732 603 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ChadlE9Q7T7 748 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfp607bG3X9H3 648 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm10338K7N692 204 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pdlim3O70209 316 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Klrg1O88713 188 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tgfb1P04202 390 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Syt4P40749 425 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ctbp2P56546 445 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fgf1P61148 155 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Apoc2Q05020 97 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Arhgef9Q3UTH8 516 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nlrc3Q5DU56 1064 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nox3Q672J9 568 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PianpQ6P1B3 278 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Chst9Q76EC5 413 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1161Q7TR29 321 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pgr15lQ80T54 456 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nceh1Q8BLF1 408 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fjx1Q8BQB4 450 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pex5lQ8C437 567 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Lysmd4Q8CC84 293 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Erlec1Q8VEH8 483 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr54Q8VFE6 313 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr353Q8VGK0 311 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 3110001I22RikQ9CZ70 312 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Eral1Q9CZU4 437 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Plekhj1Q9D240 164 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Capns2Q9D7J7 247 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmigd1Q9D7L8 261 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cd302Q9DCG2 228 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hipk2Q9QZR5 1196 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mapk9Q9WTU6 423 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ak4Q9WUR9 223 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Auts2A0A087WPF7 1261 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 A0A286YDM2 672 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Spats1A2RRY8 269 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rnpepl1G5E872 720 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn2r102L7N279 857 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc10a1O08705 362 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Aldh1a7O35945 501 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 LipcP27656 510 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hoxd1Q01822 328 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ccdc106Q3ULM0 279 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Eml4Q3UMY5 988 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Znf513Q6PD29 541 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Morn4Q6PGF2 146 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Acsm4Q80W40 580 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 McubQ810S1 345 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tm9sf4Q8BH24 643 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nup107Q8BH74 926 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cd99l2Q8BIF0 237 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Swi5Q8K3D3 89 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1284Q8VF29 311 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kiss1rQ91V45 396 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 MtpapQ9D0D3 585 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Clca3a2Q9EQR4 902 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Znf207Q9JMD0 495 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PrknQ9WVS6 464 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cldn6Q9Z262 219 aa9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Igf2rQ07113 2483 aaKnown RBP9.22□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 KcpQ3U492 1550 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 TomtA1Y9I9 258 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Xpnpep2B1AVD1 674 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmem265E9Q8G3 109 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fabp7P51880 132 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 SgcgP82348 291 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PmlQ60953 885 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kiss1Q6Y4S4 130 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr871Q7TRF0 311 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr406Q7TRX0 323 aa9.21□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Rims3Q80U57 307 aa9.21□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms