RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Hivep2Q3UHF7 2430 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NacaP70670 2187 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm14401A2ARV7 303 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fam71e2L7N480 754 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Psmd4O35226 376 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fv4P11370 679 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cpxcr1Q3V0P1 322 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp235Q499D5 702 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rassf5Q5EBH1 413 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 4930512M02RikQ5SQK8 218 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Arhgap20Q6IFT4 1182 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm5346Q7M766 736 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Reep1Q8BGH4 201 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Csnk1g2Q8BVP5 415 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fam25cQ8CF02 89 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ndc1Q8VCB1 673 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 CthQ8VCN5 398 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr61Q8VGM2 311 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 EedQ921E6 441 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ceacam2Q925P2 520 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cyp4f3Q99N16 524 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Lrrc4Q99PH1 652 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Bcl2l14Q9CPT0 328 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ncbp2Q9CQ49 156 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Txndc17Q9CQM5 123 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cst11Q9D269 139 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fam45aQ9D8N2 357 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem9bQ9JJR8 199 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 AadatQ9WVM8 425 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mocs2Q9Z223 189 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 FlnbQ80X90 2602 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tbc1d25A1A5B6 742 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eif2b3B1AUN2 452 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 2410141K09RikK7N769 464 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbxw15L7N1X6 466 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 RbpjlO08674 515 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Foxq1O70220 400 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 P01657 111 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Svs4P18419 113 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nudt2P56380 147 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 B3gnt4Q1RLK6 350 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Defb43Q30KM9 69 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Lrrc28Q3TX51 367 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Methig1Q76I26 264 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 LsampQ8BLK3 341 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mon1bQ8BMQ8 553 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ankmy1Q8C0W1 906 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 EfhbQ8CDU5 853 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 KptnQ8VCX6 430 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr1443Q8VFW8 312 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr583Q8VG25 319 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sp7Q8VI67 428 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dhrs7Q9CXR1 338 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Klhdc8bQ9D2D9 354 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mrpl19Q9D338 292 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Acp1Q9D358 158 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dusp3Q9D7X3 185 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eif3kQ9DBZ5 218 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbxw5Q9QXW2 573 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eif3iQ9QZD9 325 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Itgb6Q9Z0T9 787 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm13040A2A8C4 496 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Kiaa1324A2AFS3 1009 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm6882J3KMT3 313 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm6337K7N6X9 211 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm3115L7N285 211 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 IlkO55222 452 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 ArafP04627 604 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ido1P28776 407 aaKnown RBP6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem173Q3TBT3 378 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rnf224Q3UIW8 156 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Eml4Q3UMY5 988 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm10662Q3UT86 313 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rnase12Q5GAM8 145 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr140Q60878 302 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ei24Q61070 340 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nsg1Q62092 185 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rpa2Q62193 270 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ubtd2Q6PGH0 234 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Il20raQ6PHB0 546 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 H2-M10.3Q85ZW6 330 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 NagpaQ8BJ48 517 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Plekhm3Q8BM47 761 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm9881Q8BR56 211 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nuak2Q8BZN4 639 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Atxn7l2Q8C8K6 696 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fbxw17Q8CFE8 466 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ubqln1Q8R317 582 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ppp1r8Q8R3G1 351 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mul1Q8VCM5 352 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr763Q8VGC1 309 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Isoc1Q91V64 297 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nck1Q99M51 377 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prl7c1Q9CRB5 251 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Chchd2Q9D1L0 153 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Kti12Q9D1R2 351 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Syvn1Q9DBY1 612 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slc19a2Q9EQN9 498 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Stk19Q9JHN8 254 aa6.47□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Il22Q9JJY9 179 aa6.47□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms