RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TMED10P49755 219 aaKnown RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 GSK3BP49841 420 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 CRISP3P54108 245 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 CDK6Q00534 326 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PLCXD2Q0VAA5 305 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 MFAP5Q13361 173 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 VEZF1Q14119 521 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 MAPK11Q15759 364 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 NNATQ16517 81 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 NTRK2Q16620 822 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 TBR1Q16650 682 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 CYP51A1Q16850 503 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF791Q3KP31 576 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 GPAT3Q53EU6 434 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 REEP3Q6NUK4 255 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 FIGNL1Q6PIW4 674 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ASRGL1Q7L266 308 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 IFNEQ86WN2 208 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 MICU2Q8IYU8 434 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 TMEM156Q8N614 296 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ANKFN1Q8N957 763 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 OR2T12Q8NG77 320 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ASB15Q8WXK1 588 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HAS2Q92819 552 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 SMAD5Q99717 465 aaKnown RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 THTPAQ9BU02 230 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 CADM1Q9BY67 442 aaKnown RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HOXD1Q9GZZ0 328 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 LRMDAQ9H2I8 198 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PIF1Q9H611 641 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 TRIM45Q9H8W5 580 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PCDHGB7Q9Y5F8 929 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PCDHGA9Q9Y5G4 932 aaKnown RBP11.35□□□□□ -0.59
LINC00339-213ENST00000642137 CPAMD8Q8IZJ3 1885 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 C5orf58C9J3I9 102 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SLC28A2O43868 658 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PGM3O95394 542 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 H6PDO95479 791 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 IGKV1D-16P01601 117 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 BCHEP06276 602 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 ATP6V1C1P21283 382 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 ME2P23368 584 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 IL12BP29460 328 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PCGF2P35227 344 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SOX3P41225 446 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 HLCSP50747 726 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 FUT5Q11128 374 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 CEACAM7Q14002 265 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SCARB2Q14108 478 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 EFR3AQ14156 821 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 CCNJQ5T5M9 372 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 INTS11Q5TA45 600 aaKnown RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 TYW3Q6IPR3 259 aaKnown RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PGM2L1Q6PCE3 622 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PRR22Q8IZ63 422 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 BEST3Q8N1M1 668 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 FBXW8Q8N3Y1 598 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 HIPK4Q8NE63 616 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 NFKBIDQ8NI38 313 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 TTC9Q92623 222 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 MAL2Q969L2 176 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 TMCO6Q96DC7 493 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SPACA9Q96E40 222 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 TMEM19Q96HH6 336 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SGCZQ96LD1 299 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 COL21A1Q96P44 957 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 ADOQ96SZ5 270 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 KCTD14Q9BQ13 255 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF350Q9GZX5 532 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 RNF32Q9H0A6 362 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 SLC38A1Q9H2H9 487 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PRORYQ9H606 182 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 ZBTB20Q9HC78 741 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-213ENST00000642137 FBXO34Q9NWN3 711 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 WDR45Q9Y484 360 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 PCDHGA10Q9Y5H3 936 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 NCOR2Q9Y618 2525 aa11.34□□□□□ -0.59
LINC00339-213ENST00000642137 TP53I11O14683 189 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 FCMRO60667 390 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 OR6B1O95007 311 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ALPPP05187 535 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CHRM4P08173 479 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CYP4B1P13584 511 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ETS2P15036 469 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 PGM1P36871 562 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CD96P40200 585 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 RFX3P48380 749 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CYB561P49447 251 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ATP12AP54707 1039 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 RPP38P78345 283 aaKnown RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 HPCAP84074 193 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 CHRNEQ04844 493 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 RAPSNQ13702 412 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 FXNQ16595 210 aa11.33□□□□□ -0.6
LINC00339-213ENST00000642137 ZNF468Q5VIY5 522 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-213ENST00000642137 TMEM81Q6P7N7 255 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms