RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-230	ENST00000640657	BTBD2	Q9BX70	525 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	C1QTNF7	Q9BXJ2	289 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CARS2	Q9HA77	564 aa	Known RBP	4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SCPEP1	Q9HB40	452 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	LTB4R2	Q9NPC1	389 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	C1GALT1	Q9NS00	363 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CPA4	Q9UI42	421 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MKL2	Q9ULH7	1088 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	NOP16	Q9Y3C1	178 aa	Known RBP	4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	RNF215	Q9Y6U7	377 aa		4.75	□□□□□ -1.65
HNRNPU-230	ENST00000640657	DNAJC25-GNG10	A0A024R161	153 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	GXYLT2	A0PJZ3	443 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MTMR11	A4FU01	709 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TRABD2B	A6NFA1	517 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	NPIPB8	E9PQR5	432 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SYT5	O00445	386 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CDK2AP1	O14519	115 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PTGES	O14684	152 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	EMC8	O43402	210 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SSX5	O60225	188 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ELFN1	P0C7U0	828 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	HOXB1	P14653	301 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	S100P	P25815	95 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	AOAH	P28039	575 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	FNTB	P49356	437 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	HOXA1	P49639	335 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SEC61A1	P61619	476 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	GPR17	Q13304	367 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PUM1	Q14671	1186 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	KIAA0040	Q15053	153 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PGGHG	Q32M88	737 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ACSM3	Q53FZ2	586 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ALG1L	Q6GMV1	187 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	RAET1G	Q6H3X3	334 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SFXN4	Q6P4A7	337 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PODNL1	Q6PEZ8	512 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	NXPE4	Q6UWF7	544 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ENPP7	Q6UWV6	458 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TMUB2	Q71RG4	321 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	DGLUCY	Q7Z3D6	616 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	COMMD6	Q7Z4G1	85 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	LIMS2	Q7Z4I7	341 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CAMKMT	Q7Z624	323 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	RNF180	Q86T96	592 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PTOV1	Q86YD1	416 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SIAH3	Q8IW03	269 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TRAM1L1	Q8N609	369 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ZNF614	Q8N883	585 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	FAM181A	Q8N9Y4	354 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ZSCAN1	Q8NBB4	408 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	OR10Z1	Q8NGY1	313 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SFXN5	Q8TD22	340 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MARC2	Q969Z3	335 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	NKX6-2	Q9C056	277 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	UNKL	Q9H9P5	680 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	BEX1	Q9HBH7	125 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MEPE	Q9NQ76	525 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MRPL17	Q9NRX2	175 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CYSLTR2	Q9NS75	346 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SEMA4G	Q9NTN9	838 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PADI3	Q9ULW8	664 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	GTF2A1L	Q9UNN4	478 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TRBV5-3	A0A0A0MS03	114 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	C5orf51	A6NDU8	294 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	KHNYN	O15037	678 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SGCE	O43556	437 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	CDC40	O60508	579 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SCGN	O76038	276 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	EGF	P01133	1207 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SLC35G4	P0C7Q5	338 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	PRSS56	P0CW18	603 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	AKAIN1	P0CW23	69 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TPT1	P13693	172 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	HPGD	P15428	266 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ELAVL4	P26378	380 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	HNF1B	P35680	557 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	GCGR	P47871	477 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	RAB5C	P51148	216 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	FAM189B	P81408	668 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	HTR4	Q13639	388 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	RBMS2	Q15434	407 aa	Known RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ZNF791	Q3KP31	576 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TMEM35A	Q53FP2	167 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	AKIRIN2	Q53H80	203 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SLC25A30	Q5SVS4	291 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	OVCH1	Q7RTY7	1134 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ZER1	Q7Z7L7	766 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	MSRB3	Q8IXL7	192 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	NLGN4X	Q8N0W4	816 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	SPIC	Q8N5J4	248 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ZFP41	Q8N8Y5	198 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	OR4M1	Q8NGD0	313 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TMEM169	Q96HH4	297 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	TBX5	Q99593	518 aa		4.74	□□□□□ -1.65
HNRNPU-230	ENST00000640657	ATF6B	Q99941	703 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms