RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 GPRIN3Q6ZVF9 776 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 LDB1Q86U70 411 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZDHHC21Q8IVQ6 265 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PSD4Q8NDX1 1056 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SLC13A3Q8WWT9 602 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 METTL21AQ8WXB1 218 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MUS81Q96NY9 551 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 VPS25Q9BRG1 176 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ASPNQ9BXN1 380 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 OR51E2Q9H255 320 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 C12orf65Q9H3J6 166 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 TMEM185BQ9H7F4 350 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SMURF2Q9HAU4 748 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 RANGRFQ9HD47 186 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 C19orf25Q9UFG5 118 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 STUB1Q9UNE7 303 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PCYT1BQ9Y5K3 369 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 FKBP7Q9Y680 259 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SEC16AO15027 2179 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MYO16Q9Y6X6 1858 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PTPRDP23468 1912 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 A0A1W2PR77 199 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TMEM202A6NGA9 273 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 C4orf47A7E2U8 309 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PRKYO43930 277 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 UGDHO60701 494 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PRAF2O60831 178 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZNF780AO75290 641 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 AHSA1O95433 338 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MAN2A2P49641 1150 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CTSCP53634 463 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 RPS15AP62244 130 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 SIM1P81133 766 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 SF3A2Q15428 464 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 UGT8Q16880 541 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 DEFB133Q30KQ1 61 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 XKR6Q5GH73 641 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZNF534Q76KX8 674 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 VN1R5Q7Z5H4 357 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CLRN3Q8NCR9 226 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZFAND1Q8TCF1 268 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SELENOMQ8WWX9 145 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TAAR8Q969N4 342 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 BHLHE41Q9C0J9 482 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 HOXD1Q9GZZ0 328 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZBTB26Q9HCK0 441 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SEMA4BQ9NPR2 832 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 THSD1Q9NS62 852 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SNX11Q9Y5W9 270 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CLCA3PQ9Y6N3 262 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CCDC187A0A096LP49 1063 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 A0A0J9YY10 115 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 SLC5A10A0PJK1 596 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 A6NL46 340 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PEX12O00623 359 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PCDH17O14917 1159 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 YY2O15391 372 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 LYRM1O43325 122 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CLDN9O95484 217 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 LINC00032P0C843 101 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 PET100P0DJ07 73 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TSPAN8P19075 237 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MESP2Q0VG99 397 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 LCP2Q13094 533 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 HNRNPA0Q13151 305 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 MADCAM1Q13477 382 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZNF542PQ5EBM4 170 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MANEAQ5SRI9 462 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 OR4E2Q8NGC2 313 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SLC35B4Q969S0 331 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZFP3Q96NJ6 502 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 IP6K3Q96PC2 410 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 NKX6-2Q9C056 277 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 MS4A12Q9NXJ0 267 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MARCH4Q9P2E8 410 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 RPS6KB2Q9UBS0 482 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 C5orf51A6NDU8 294 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TARM1B6A8C7 271 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SOCS2O14508 198 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 VAMP1P23763 118 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 RPL10P27635 214 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 MAP2K4P45985 399 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 GBX2P52951 348 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 LIMK1P53667 647 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TOR2AQ5JU69 321 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ANXA8L1Q5VT79 327 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 TEX19Q8NA77 164 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 OR2L8Q8NGY9 312 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SGCDQ92629 289 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 BTBD2Q9BX70 525 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 MMP28Q9H239 520 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 CCDC86Q9H6F5 360 aaKnown RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 PELI2Q9HAT8 420 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 ZNF490Q9ULM2 529 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 OARD1Q9Y530 152 aa5.36□□□□□ -1.55
RTTN-218ENST00000640408 SPIN1Q9Y657 262 aaPredicted RBP5.36□□□□□ -1.55
RTTN-218ENST00000640408 TSC2P49815 1807 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms