RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 DPP10Q8N608 796 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 FAM110BQ8TC76 370 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 XAGE5Q8WWM1 108 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 BTBD2Q9BX70 525 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 TRIM8Q9BZR9 551 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PCDHGB6Q9Y5F9 930 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 ATMQ13315 3056 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PRAMEF27A3QJZ7 478 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 EIF4E1BA6NMX2 242 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CLIC1O00299 241 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 MRASO14807 208 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 ICOSLGO75144 302 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 RASAL1O95294 804 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 ETFAP13804 333 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CNR1P21554 472 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 RFC3P40938 356 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 PTGDSP41222 190 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CASP3P42574 277 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CRATP43155 626 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 KHKP50053 298 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 MLLT10P55197 1068 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 FUT5Q11128 374 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 NFYCQ13952 458 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 SELPLGQ14242 412 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CAPRIN1Q14444 709 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 MMEL1Q495T6 779 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 OR52N2Q8NGI0 321 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 RP9Q8TA86 221 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 GRHL3Q8TE85 626 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 CGREF1Q99674 301 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 IKZF5Q9H5V7 419 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 MRTO4Q9UKD2 239 aaKnown RBP12.11□□□□□ -0.47
GTF3A-209ENST00000640289 NTNG1Q9Y2I2 539 aa12.11□□□□□ -0.47
GTF3A-209ENST00000640289 NPIPA5A0A0B4J1W7 369 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 DUXAA6NLW8 204 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 TTLL8A6PVC2 850 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 BBIP1A8MTZ0 92 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 NPIPA7E9PJI5 369 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 SUV39H1O43463 412 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 ASNA1O43681 348 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 ABCB7O75027 752 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 UTS2O95399 124 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 NPIPA8P0DM63 369 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 PSMD4P55036 377 aaKnown RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 STX5Q13190 355 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 EFR3AQ14156 821 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 RGNQ15493 299 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 INPP5JQ15735 1006 aaPredicted RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 C10orf111Q8N326 155 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 CHDHQ8NE62 594 aaPredicted RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 OR2M7Q8NG81 312 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 BCAS4Q8TDM0 211 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 RCN3Q96D15 328 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 SDF2Q99470 211 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 SLC39A3Q9BRY0 314 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 ANGPTL4Q9BY76 406 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 METTL7AQ9H8H3 244 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 EXD2Q9NVH0 621 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 TUBA8Q9NY65 449 aaPredicted RBP12.1□□□□□ -0.47
GTF3A-209ENST00000640289 KLRF1Q9NZS2 232 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 CNIH4Q9P003 139 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 PCDHGB3Q9Y5G1 929 aa12.1□□□□□ -0.47
GTF3A-209ENST00000640289 PRAMEF25A6NGN4 478 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 C17orf51A8MQB3 221 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 B8ZZF3 427 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FXYD1O00168 92 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 SCO2O43819 266 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FADS1O60427 444 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 FCMRO60667 390 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 DCTN3O75935 186 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 SOX30O94993 753 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 ZIC2O95409 532 aaPredicted RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 NUDT7P0C024 238 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 MTPNP58546 118 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 KCNJ2P63252 427 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 RPP38P78345 283 aaKnown RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 SYPL1Q16563 259 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
GTF3A-209ENST00000640289 GRAMD1BQ3KR37 738 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 ARHGAP11BQ3KRB8 267 aa12.09□□□□□ -0.47
GTF3A-209ENST00000640289 COQ5Q5HYK3 327 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms