RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 RPL3LQ92901 407 aaKnown RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 BIRC7Q96CA5 298 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 SH3YL1Q96HL8 342 aaPredicted RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 AGAP4Q96P64 663 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 RIT2Q99578 217 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 NPAS2Q99743 824 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 FAM173AQ9BQD7 235 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 RPP25Q9BUL9 199 aaKnown RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 GPN2Q9H9Y4 310 aaPredicted RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 DEPPQ9NTK1 212 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 MRPL39Q9NYK5 338 aaKnown RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 AIPL1Q9NZN9 384 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 GALPQ9UBC7 116 aa5.36□□□□□ -1.55
RFC1-217ENST00000639695 EXOSC1Q9Y3B2 195 aaKnown RBP5.36□□□□□ -1.55
RFC1-217ENST00000639695 NSD2O96028 1365 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 A0A1W2PNV4 684 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 FAM74A7A6NL05 159 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 E9PBE3 544 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 C11orf98E9PRG8 122 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 PPIHO43447 177 aaKnown RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 KLHL41O60662 606 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 ERLIN1O75477 346 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CLDN1O95832 211 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CAPN1P07384 714 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 OR9G9P0C7N8 305 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 FOSL2P15408 326 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 SSR1P43307 286 aaKnown RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 IDI1Q13907 227 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 GANABQ14697 944 aaKnown RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 RAB35Q15286 201 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 SSX2Q16385 188 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 FAM74A3Q4VXF1 159 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 C10orf120Q5SQS8 335 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CELF3Q5SZQ8 465 aaKnown RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 SLX4IPQ5VYV7 408 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 BSPRYQ5W0U4 402 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 DOK6Q6PKX4 331 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 HACD2Q6Y1H2 254 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 Q6ZTC4 211 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 LRRC75A-AS1Q8N1F1 130 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 UBE2J2Q8N2K1 259 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 BBS5Q8N3I7 341 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 METTL4Q8N3J2 472 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CLDN19Q8N6F1 224 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 STXBP6Q8NFX7 210 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 OR8J1Q8NGP2 316 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 OR1B1Q8NGR6 318 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 NANPQ8TBE9 248 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 NT5C3BQ969T7 300 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 C11orf52Q96A22 123 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 SDSLQ96GA7 329 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 TGM7Q96PF1 710 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 F2RL3Q96RI0 385 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 RNF41Q9H4P4 317 aaPredicted RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 PLCXD1Q9NUJ7 323 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 ETNK2Q9NVF9 386 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 PIPOXQ9P0Z9 390 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CDH9Q9ULB4 789 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 MGAT4AQ9UM21 535 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 CAB39Q9Y376 341 aaPredicted RBP5.35□□□□□ -1.55
RFC1-217ENST00000639695 TMED5Q9Y3A6 229 aa5.35□□□□□ -1.55
RFC1-217ENST00000639695 TRBV5-4A0A0C4DH59 114 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 MFSD2BA6NFX1 497 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 STX7O15400 261 aaKnown RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 N4BP1O75113 896 aaKnown RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 SERPINA3P01011 423 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 FCGR3AP08637 254 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 HOXB7P09629 217 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 PATE4P0C8F1 98 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 HSMCR30P0CW71 290 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 HSD17B1P14061 328 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 HAND2P61296 217 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 BDH1Q02338 343 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 TMEM187Q14656 261 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 FAM76BQ5HYJ3 339 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 ADAMTSL4-AS1Q5T5F5 129 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 WDR25Q64LD2 544 aaPredicted RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 TPGS2Q68CL5 300 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 GCNT7Q6ZNI0 430 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 Q6ZRP5 223 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 CEACAM19Q7Z692 300 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 SPEM1Q8N4L4 309 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 ZSCAN4Q8NAM6 433 aaPredicted RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 LRRC15Q8TF66 581 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 C18orf25Q96B23 403 aaPredicted RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 ATXN7L3BQ96GX2 97 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 COQ2Q96H96 371 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 RPRD1AQ96P16 312 aaPredicted RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 MOB1AQ9H8S9 216 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 IL1RL2Q9HB29 575 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 SGK2Q9HBY8 427 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 ESM1Q9NQ30 184 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 NDE1Q9NXR1 346 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 UTP6Q9NYH9 597 aaKnown RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 CYTH4Q9UIA0 394 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 ICAM5Q9UMF0 924 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 EXOGQ9Y2C4 368 aaKnown RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 MRPS28Q9Y2Q9 187 aaKnown RBP5.34□□□□□ -1.55
RFC1-217ENST00000639695 GMPPBQ9Y5P6 360 aa5.34□□□□□ -1.55
RFC1-217ENST00000639695 TRBV7-9A0A0J9YWB2 115 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms