RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 PDE5AO76074 875 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 OAS1P00973 400 aaKnown RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 GIPP09681 153 aaPredicted RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 EZRP15311 586 aaKnown RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 IGLL1P15814 213 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 GJB2P29033 226 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 KIR2DS2P43631 304 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 PITPNAQ00169 270 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF85Q03923 595 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF616Q08AN1 781 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF154Q13106 437 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 CAMK4Q16566 473 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 HKDC1Q2TB90 917 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 GPAT3Q53EU6 434 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 C10orf62Q5T681 223 aaPredicted RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 C6orf89Q6UWU4 347 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 BTNL8Q6UX41 500 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 CENPVQ7Z7K6 275 aaPredicted RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 GOLGA5Q8TBA6 731 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 RPGRIP1Q96KN7 1286 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 RNF157Q96PX1 679 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 CDC42EP4Q9H3Q1 356 aaKnown RBP-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 FANCFQ9NPI8 374 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 PDRG1Q9NUG6 133 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 PLEK2Q9NYT0 353 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 OR1A1Q9P1Q5 309 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 VPS18Q9P253 973 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 DEC1Q9P2X7 70 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 SWAP70Q9UH65 585 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 SLC9A8Q9Y2E8 581 aa-0.64□□□□□ -2.51
LMBR1-222ENST00000638959 IGLV11-55A0A075B6I3 123 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 A0A0A6YYD4 124 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 SMIM28A0A1B0GU29 152 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 RBFOX2O43251 390 aaKnown RBP eCLIP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 ACSL4O60488 711 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 SCGB1D1O95968 90 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 MOCS2O96007 188 aaPredicted RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 COX7A1P24310 79 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 ACAT1P24752 427 aaKnown RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 SAA4P35542 130 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 RGS7P49802 495 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF816Q0VGE8 651 aaPredicted RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 FOXF1Q12946 379 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 GK2Q14410 553 aaPredicted RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 IHHQ14623 411 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 CFAP221Q4G0U5 840 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 DDI2Q5TDH0 399 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 RHBDD2Q6NTF9 364 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 LCA5Q86VQ0 697 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 C17orf64Q86WR6 236 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 TTC39CQ8N584 583 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 DEFB119Q8N690 84 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 OR2A12Q8NGT7 310 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 BMFQ96LC9 184 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 ZNF717Q9BY31 904 aaPredicted RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 UNC45AQ9H3U1 944 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 FN3KQ9H479 309 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 EPS15L1Q9UBC2 864 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 BTNL2Q9UIR0 455 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 NOCTQ9UK39 431 aaKnown RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 UBQLN1Q9UMX0 589 aaKnown RBP-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 OR1A2Q9Y585 309 aa-0.65□□□□□ -2.51
LMBR1-222ENST00000638959 C19orf81C9J6K1 198 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 PTGES3LE9PB15 166 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 E9PLD3 99 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 LGALS9O00182 355 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 TNFSF13O75888 250 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 AKAP3O75969 853 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 ALOX12P18054 663 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 SDC1P18827 310 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 OPRD1P41143 372 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CDX1P47902 265 aaPredicted RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 LIMK1P53667 647 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 MFAP3P55082 362 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 NAP1L1P55209 391 aaKnown RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 HAND2P61296 217 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 MFGE8Q08431 387 aaPredicted RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 PPIDQ08752 370 aaKnown RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CETN1Q12798 172 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 ZNF235Q14590 738 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 TXNRD3NBQ6F5E7 133 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 SPINT4Q6UDR6 99 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CAMKMTQ7Z624 323 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CAMK2N1Q7Z7J9 78 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 ITIH5Q86UX2 942 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 SKA3Q8IX90 412 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 THEM5Q8N1Q8 247 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 LRRC52Q8N7C0 313 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CNNM3Q8NE01 707 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 OR8H1Q8NGG4 311 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 NCOA7Q8NI08 942 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 ATP6V0A1Q93050 837 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 SPSB1Q96BD6 273 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 TMCO6Q96DC7 493 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 PRMT1Q99873 361 aaKnown RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 MRPL1Q9BYD6 325 aaKnown RBP-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 SLC25A22Q9H936 323 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 TMEM106BQ9NUM4 274 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 CRYL1Q9Y2S2 319 aa-0.66□□□□□ -2.52
LMBR1-222ENST00000638959 TMED7Q9Y3B3 224 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms