RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 FRG2CA6NGY1 282 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 GNGT2O14610 69 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 DPM1O60762 260 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 PRSS23O95084 383 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 ZIC2O95409 532 aaPredicted RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 MT-ND1P03886 318 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 DBIP07108 87 aaKnown RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 UMODP07911 640 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 PABPC4LP0CB38 370 aaKnown RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 ATP6V1C1P21283 382 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 RPS15P62841 145 aaKnown RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 VLDLRP98155 873 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 KCNC4Q03721 635 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 LARS2Q15031 903 aaKnown RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 ZNF311Q5JNZ3 666 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 CCNJQ5T5M9 372 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 LPCAT4Q643R3 524 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 DHRS4L2Q6PKH6 230 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 C17orf47Q8NEP4 570 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 NLGN4YQ8NFZ3 816 aaPredicted RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 GPR32P1Q8NGA4 272 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 OR52P1PQ8NH57 321 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 ZG16BQ96DA0 208 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 HSPBAP1Q96EW2 488 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 VMP1Q96GC9 406 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 ZNF347Q96SE7 839 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 WDR77Q9BQA1 342 aaPredicted RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 GPR87Q9BY21 358 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 KLHL4Q9C0H6 718 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 ZNF700Q9H0M5 742 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 SEMA6AQ9H2E6 1030 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 THSD1Q9NS62 852 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 FBXO34Q9NWN3 711 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 MRTO4Q9UKD2 239 aaKnown RBP10.9□□□□□ -0.66
CLN6-223ENST00000637823 OR10H1Q9Y4A9 318 aa10.9□□□□□ -0.66
CLN6-223ENST00000637823 PTPRZ1P23471 2315 aaPredicted RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 EXPH5Q8NEV8 1989 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 FAM149AA5PLN7 773 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 AGAP5A6NIR3 686 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 C21orf140B9A014 251 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 hCG_2039718K7EN88 272 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 SYT5O00445 386 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 TO15178 435 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 ACOX3O15254 700 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 KIAA0513O60268 411 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 LGI1O95970 557 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 IFNW1P05000 195 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 THBS1P07996 1170 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 RPS4Y1P22090 263 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 MMP11P24347 488 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 CD82P27701 267 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 RBMS1P29558 406 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 PRKAR1BP31321 381 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 PSMD4P55036 377 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 SLC26A5P58743 744 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 PUM1Q14671 1186 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLN6-223ENST00000637823 SSPNQ14714 243 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 EBPQ15125 230 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 GPR68Q15743 365 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 DECR1Q16698 335 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLN6-223ENST00000637823 IQCCQ4KMZ1 466 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 OR2T5Q6IEZ7 315 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 FIGNL1Q6PIW4 674 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 HSDL2Q6YN16 418 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 TMPRSS7Q7RTY8 843 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 C9orf40Q8IXQ3 194 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 BCORP1Q8N888 145 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 ZSCAN1Q8NBB4 408 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 OR4N2Q8NGD1 307 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 OR2T29Q8NH02 315 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 OR8K3Q8NH51 312 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 APOBEC4Q8WW27 367 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 TP53INP1Q96A56 240 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 EME1Q96AY2 570 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 NACC2Q96BF6 587 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 VPS50Q96JG6 964 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 RSPO3Q9BXY4 272 aaPredicted RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 WWTR1Q9GZV5 400 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 NXF5Q9H1B4 397 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 EVA1AQ9H8M9 152 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 NTN4Q9HB63 628 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 CDV3Q9UKY7 258 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 CNOT11Q9UKZ1 510 aaKnown RBP10.89□□□□□ -0.67
CLN6-223ENST00000637823 TCFL5Q9UL49 500 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 SLC9A8Q9Y2E8 581 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 SH3GLB1Q9Y371 365 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 ENPP4Q9Y6X5 453 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 GVINP1Q7Z2Y8 2422 aa10.89□□□□□ -0.67
CLN6-223ENST00000637823 IGHV1-45A0A0A0MS14 117 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 A0A1W2PQ72 361 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 GFRA3O60609 400 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 RAD1O60671 282 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 SEC24DO94855 1032 aaPredicted RBP10.88□□□□□ -0.67
CLN6-223ENST00000637823 IL33O95760 270 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 IGKV1D-16P01601 117 aa10.88□□□□□ -0.67
CLN6-223ENST00000637823 IL7RP16871 459 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms