RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 HOXB5P09067 269 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 NUDT17P0C025 328 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RAB40ALP0C0E4 278 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 LINC00614P0C842 121 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PPIAL4FP0DN26 164 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RNH1P13489 461 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 FAHP16930 419 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 GOT1P17174 413 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PRPH2P23942 346 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CD82P27701 267 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 C21orf33P30042 268 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 PPP2R1BP30154 601 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 KDELR2P33947 212 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 AHRP35869 848 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ACVR1BP36896 505 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CFHR2P36980 270 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MPLP40238 635 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MAGEA3P43357 314 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 HOXA1P49639 335 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 NUMBP49757 651 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 KPNA2P52292 529 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 NKX2-5P52952 324 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 PTTG1IPP53801 180 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 NAPAP54920 295 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TMEM33P57088 247 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 POLR2LP62875 67 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 HERVK_113P63132 956 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ERVK-25P63136 954 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PSPHP78330 225 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CDR2Q01850 454 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ZNF45Q02386 682 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TLE3Q04726 772 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 DSC1Q08554 894 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SREBF2Q12772 1141 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ORC2Q13416 577 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 MED21Q13503 144 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 KRT81Q14533 505 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ACOX1Q15067 660 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CYTH1Q15438 398 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SLC9A3R2Q15599 337 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TOMM34Q15785 309 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 EZH2Q15910 746 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 ZBTB6Q15916 424 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ACKR1Q16570 336 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TBR1Q16650 682 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ZNF699Q32M78 642 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 BSXQ3C1V8 233 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ACCSLQ4AC99 568 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 AGKQ53H12 422 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 AKIRIN2Q53H80 203 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PAN3Q58A45 887 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 C19orf54Q5BKX5 351 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 HACD4Q5VWC8 232 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ALS2CLQ60I27 953 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TCEAL6Q6IPX3 200 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SLC8B1Q6J4K2 584 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ULK3Q6PHR2 472 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 BHLHB9Q6PI77 547 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 C16orf89Q6UX73 402 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SIGLEC15Q6ZMC9 328 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PPP1R32Q7Z5V6 425 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 NRARPQ7Z6K4 114 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 ADGRE4PQ86SQ3 457 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SERPINA9Q86WD7 417 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RNF130Q86XS8 419 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CACUL1Q86Y37 369 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TDRPQ86YL5 185 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TMPRSS6Q8IU80 811 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TGIF2LXQ8IUE1 241 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CRLF3Q8IUI8 442 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CMTM8Q8IZV2 173 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 ARHGAP24Q8N264 748 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SLC44A3Q8N4M1 653 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 UBL4BQ8N7F7 174 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 LMNTD1Q8N9Z9 388 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SYT14Q8NB59 555 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SIDT2Q8NBJ9 832 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 CATSPER1Q8NEC5 780 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 DDHD1Q8NEL9 900 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 OR2L5Q8NG80 312 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 OR10A7Q8NGE5 316 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 OR5AN1Q8NGI8 311 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RNASE11Q8TAA1 199 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 MRGPRDQ8TDS7 321 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CXorf40AQ8TE69 158 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 GIPC3Q8TF64 312 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 SPRYD4Q8WW59 207 aaPredicted RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 PIH1D2Q8WWB5 315 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CLEC4DQ8WXI8 215 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 RPL3LQ92901 407 aaKnown RBP2.78□□□□□ -1.96
VIM-210ENST00000637053 NAT6Q93015 286 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 P2RX5Q93086 422 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 PIGTQ969N2 578 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 WBP2Q969T9 261 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 BIRC7Q96CA5 298 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 MTBPQ96DY7 904 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 CMTM5Q96DZ9 223 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 FBXO17Q96EF6 278 aa2.78□□□□□ -1.96
VIM-210ENST00000637053 TCEAL4Q96EI5 215 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms