RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OR5D16Q8NGK9 328 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 ZDHHC1Q8WTX9 485 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 RSC1A1Q92681 617 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 UBE2FQ969M7 185 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 CNRIP1Q96F85 164 aaPredicted RBP10.81□□□□□ -0.68
CLN6-217ENST00000636964 AMDHD1Q96NU7 426 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 OR2A5Q96R48 311 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 SARGQ9BW04 601 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 FAIM2Q9BWQ8 316 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 DDX28Q9NUL7 540 aaKnown RBP10.81□□□□□ -0.68
CLN6-217ENST00000636964 TMEM74BQ9NUR3 256 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 PPP1R14DQ9NXH3 145 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 COQ3Q9NZJ6 369 aa10.81□□□□□ -0.68
CLN6-217ENST00000636964 EFCAB9A8MZ26 197 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 SNX4O95219 450 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 BCHEP06276 602 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 PPM1FP49593 454 aaPredicted RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 SELENOWP63302 87 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 GPR19Q15760 415 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 DUSP7Q16829 419 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 MRM1Q6IN84 353 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 HMGN2P46Q86SG4 172 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 AKAP1Q92667 903 aaKnown RBP eCLIP10.8□□□□□ -0.682e-7■■□□□ 11.5
CLN6-217ENST00000636964 ZHX1-C8orf76Q96EF9 292 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 DOHHQ9BU89 302 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 SPATA9Q9BWV2 254 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 C6orf62Q9GZU0 229 aaPredicted RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 C14orf119Q9NWQ9 140 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 USE1Q9NZ43 259 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 MRPS17Q9Y2R5 130 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 WBP11Q9Y2W2 641 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 MRPS2Q9Y399 296 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 NINQ8N4C6 2090 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 PRSS44E7EML9 344 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 HCRTR1O43613 425 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 ANGPTL1O95841 491 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 SLC35G6P0C7Q6 338 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 DRD2P14416 443 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 CD36P16671 472 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 ALOX12P18054 663 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 UBE2IP63279 158 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 RPL6Q02878 288 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 EEF1A2Q05639 463 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 RGS1Q08116 209 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 GPR50Q13585 617 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 SAXO2Q658L1 398 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 OR4N5Q8IXE1 308 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 OR52J3Q8NH60 311 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 UTP15Q8TED0 518 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 DOK4Q8TEW6 326 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 MARC2Q969Z3 335 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 C7orf34Q96L11 122 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 NXF2Q9GZY0 626 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 POT1Q9NUX5 634 aa10.8□□□□□ -0.68
CLN6-217ENST00000636964 SAMHD1Q9Y3Z3 626 aaKnown RBP10.8□□□□□ -0.68
CLN6-217ENST00000636964 SEMG1P04279 462 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 DCNP07585 359 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 ITGA2P17301 1181 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CBLP22681 906 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 EPHA2P29317 976 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TRA2BP62995 288 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 S100A12P80511 92 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SSPNQ14714 243 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SYT16Q17RD7 645 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 DEFB110Q30KQ9 67 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ZFP69Q49AA0 526 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 PRSS41Q7RTY9 318 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TSEN54Q7Z6J9 526 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 SVOPLQ8N434 492 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ZNF555Q8NEP9 628 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SLC38A5Q8WUX1 472 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 XAGE5Q8WWM1 108 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 COL26A1Q96A83 441 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 NEURL3Q96EH8 262 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 DEPDC7Q96QD5 511 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 FYTTD1Q96QD9 318 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 NEUROD4Q9HD90 331 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ZCCHC3Q9NUD5 404 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 PDP1Q9P0J1 537 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 TRPC4Q9UBN4 977 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 PRAMEF25A6NGN4 478 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 METTL12A8MUP2 240 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 C2orf74A8MZ97 194 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 H0YGG7 62 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 PROM1O43490 865 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 TBX19O60806 448 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SDC3O75056 442 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 HMGN1P05114 100 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 OR12D1P0DN82 309 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 ARAFP10398 606 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 SPTBP11277 2137 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CYP4B1P13584 511 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 CD38P28907 300 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 RYKP34925 604 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 FRKP42685 505 aaPredicted RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 POU3F4P49335 361 aa10.79□□□□□ -0.68
CLN6-217ENST00000636964 GDI2P50395 445 aaKnown RBP10.79□□□□□ -0.68
CLN6-217ENST00000636964 LIMK1P53667 647 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms