RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ETS2P15036 469 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF30P17039 623 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 USF1P22415 310 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CRHBPP24387 322 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OTX2P32243 289 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 KDELR2P33947 212 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 RPL35P42766 123 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR4D2P58180 307 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GLO1Q04760 184 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 RAB33AQ14088 237 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 VARS2Q5ST30 1063 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PET117Q6UWS5 81 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 DPPA2Q7Z7J5 298 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TMPRSS12Q86WS5 348 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PLD5Q8N7P1 536 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NUDT10Q8NFP7 164 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR4C5Q8NGB2 326 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR5D14Q8NGL3 314 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PSMF1Q92530 271 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NUDT11Q96G61 164 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 EDEM2Q9BV94 578 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SRRQ9GZT4 340 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 C11orf68Q9H3H3 251 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CDH22Q9UJ99 828 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1W2PQ09 198 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 FOXE1O00358 373 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 P2RX6O15547 441 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TLX2O43763 284 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 NPHS1O60500 1241 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SLITRK5O94991 958 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CER1O95813 267 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TGFB1P01137 390 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ARAFP10398 606 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 MAXP61244 160 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TUSC3Q13454 348 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TEX44Q53QW1 395 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 COQ5Q5HYK3 327 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 UNC5DQ6UXZ4 953 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PYROXD2Q8N2H3 581 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CNEP1R1Q8N9A8 125 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR5A2Q8NGI9 324 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CHRDL1Q9BU40 450 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SLC25A51Q9H1U9 297 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SEMA4AQ9H3S1 761 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PTTG2Q9NZH5 202 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR6C74A6NCV1 312 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 IQCF5A8MTL0 148 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 C11orf98E9PRG8 122 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZBTB22O15209 634 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CSTAP01040 98 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CD46P15529 392 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CD1CP29017 333 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 BDKRB1P46663 353 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 TGFBIQ15582 683 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 OR8B8Q15620 311 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF181Q2M3W8 571 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 CELF3Q5SZQ8 465 aaKnown RBP5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GJB7Q6PEY0 223 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SHFQ7M4L6 423 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF546Q86UE3 836 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 SAMD8Q96LT4 415 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 GPR22Q99680 433 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 UNC93B1Q9H1C4 597 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 PIAS3Q9Y6X2 628 aa5.74□□□□□ -1.49
SCN1A-212ENST00000636194 USP31Q70CQ4 1352 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM265A0A087WTH1 108 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 MROH6A6NGR9 719 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 H2AFB2P0C5Z0 115 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 HOXB2P14652 356 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PRPS1P60891 318 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TBCEQ15813 527 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 VAMP3Q15836 100 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FADS6Q8N9I5 356 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KIRREL1Q96J84 757 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 C7orf26Q96N11 449 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TEPSINQ96N21 525 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DEFB118Q96PH6 123 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FUNDC2Q9BWH2 189 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RNF32Q9H0A6 362 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 LRIT1Q9P2V4 623 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 MED13Q9UHV7 2174 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 A6NIZ1 184 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ANHXE9PGG2 379 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KLRC4-KLRK1H3BQV0 150 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 K7EPI3 171 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GOSR1O95249 250 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TPSB2P20231 275 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 BMP6P22004 513 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 HNRNPA2B1P22626 353 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GLRA2P23416 452 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ARL2P36404 184 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 WASP42768 502 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CCL23P55773 120 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RAP1BP61224 184 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RPS14P62263 151 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RAP1AP62834 184 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OGDHQ02218 1023 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TPSAB1Q15661 275 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 STK11Q15831 433 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms