RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 ACADMP11310 421 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 LAMP2P13473 410 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 POLR2CP19387 275 aaPredicted RBP12.25□□□□□ -0.45
BRF1-222ENST00000635152 MTNR1AP48039 350 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 RGS1Q08116 209 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 SELENBP1Q13228 472 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 TRAM2Q15035 370 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 GPR68Q15743 365 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 FBXO42Q6P3S6 717 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 B3GLCTQ6Y288 498 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 PAQR7Q86WK9 346 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 LRRC25Q8N386 305 aaPredicted RBP12.25□□□□□ -0.45
BRF1-222ENST00000635152 LINC00471Q8N535 108 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 SYT14Q8NB59 555 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 MOAP1Q96BY2 351 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 ITPKCQ96DU7 683 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 MCHR1Q99705 422 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 TXNL4BQ9NX01 149 aaKnown RBP12.25□□□□□ -0.45
BRF1-222ENST00000635152 KLHL28Q9NXS3 571 aa12.25□□□□□ -0.45
BRF1-222ENST00000635152 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 UBXN7O94888 489 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 KLF8O95600 359 aaPredicted RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 GSTT2P0CG29 244 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 GSTT2BP0CG30 244 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 TRMT12Q53H54 448 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 TMPRSS11AQ6ZMR5 421 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LAPTM4BQ86VI4 370 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 OR4F15Q8NGB8 312 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 GNPDA2Q8TDQ7 276 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PATE1Q8WXA2 126 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SIPA1Q96FS4 1042 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ADAP2Q9NPF8 381 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 TIGARQ9NQ88 270 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PRODHO43272 600 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LDB3O75112 727 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SLC2A10O95528 541 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PTTG1O95997 202 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 THY1P04216 161 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 IFNA8P32881 189 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ACSL1P33121 698 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 IFNGR2P38484 337 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 NKX2-5P52952 324 aaPredicted RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 CAV3P56539 151 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 WNT4P56705 351 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 DEFA1P59665 94 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 DEFA3P59666 94 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 RPS25P62851 125 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 EFNB1P98172 346 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 TSPAN31Q12999 210 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 HNRNPA0Q13151 305 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 FAM214AQ32MH5 1076 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PRRT3Q5FWE3 981 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SLC36A4Q6YBV0 504 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PIGXQ8TBF5 258 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ASB15Q8WXK1 588 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 GAL3ST3Q96A11 431 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 C10orf90Q96M02 699 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SLC38A2Q96QD8 506 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SARGQ9BW04 601 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 CAPN10Q9HC96 672 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LIPT1Q9Y234 373 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 WDR45Q9Y484 360 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 HEBP2Q9Y5Z4 205 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 CSNK1G3Q9Y6M4 447 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ARHGEF17Q96PE2 2063 aaPredicted RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 A0A075B6Q4 140 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LOC105369274A0A096LPK9 316 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 NPIPA5A0A0B4J1W7 369 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LOC102723532A0A0G2JNH3 316 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 NPIPA7E9PJI5 369 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 EGFP01133 1207 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 NPIPA8P0DM63 369 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ACP2P11117 423 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PVRP15151 417 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ENDOUP21128 410 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 SDC2P34741 201 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SOX18P35713 384 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 OMPP47874 163 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LBX1P52954 281 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 DAB2P98082 770 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 RUNX2Q13950 521 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SHHQ15465 462 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 DUSP5Q16690 384 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 CRTC2Q53ET0 693 aaPredicted RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 KLHL22Q53GT1 634 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 MFSD12Q6NUT3 480 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 FRRS1Q6ZNA5 592 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 PRSS41Q7RTY9 318 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 SFTPA2Q8IWL1 248 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 GALNT12Q8IXK2 581 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 OR4N4Q8N0Y3 316 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 CAMKK1Q8N5S9 505 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 BBS1Q8NFJ9 593 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 FGF11Q92914 225 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 ARHGDIGQ99819 225 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 LYARQ9NX58 379 aaKnown RBP12.24□□□□□ -0.45
BRF1-222ENST00000635152 SLC7A7Q9UM01 511 aa12.24□□□□□ -0.45
BRF1-222ENST00000635152 FAM183AA6NL82 134 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms