RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 UBTD2Q8WUN7 234 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ITLN2Q8WWU7 325 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 MAGED4Q96JG8 741 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 NOL11Q9H8H0 719 aaKnown RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 C8orf4Q9NR00 106 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 PNPLA3Q9NST1 481 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 STMN3Q9NZ72 180 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF639Q9UID6 485 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 LEF1Q9UJU2 399 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 COA3Q9Y2R0 106 aaPredicted RBP4.51□□□□□ -1.69
LINC00550-201ENST00000629293 CCL27Q9Y4X3 112 aa4.51□□□□□ -1.69
LINC00550-201ENST00000629293 NPIPA5E9PKD4 350 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 PRMT5O14744 637 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 LSM1O15116 133 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC22A3O75751 556 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CDC123O75794 336 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 OR4F21O95013 312 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 H6PDO95479 791 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CHEK2O96017 543 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 STSP08842 583 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ENO2P09104 434 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HRH2P25021 359 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ACADLP28330 430 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 GABRA4P48169 554 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HTR6P50406 440 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 POLR2JP52435 117 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NR1H2P55055 460 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 KRTAP10-9P60411 292 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 EMX2Q04743 252 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MFAP5Q13361 173 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 DYNC1I2Q13409 638 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NFYCQ13952 458 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RABL3Q5HYI8 236 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TCTE1Q5JU00 501 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 COX15Q7KZN9 410 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 GOLGA7Q7Z5G4 137 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ADAMTSL2Q86TH1 951 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SPPL2CQ8IUH8 684 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 DCUN1D3Q8IWE4 304 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 GLB1L3Q8NCI6 653 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TRPV3Q8NET8 790 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ASZ1Q8WWH4 475 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC22A18Q96BI1 424 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 LURAP1Q96LR2 239 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLX1AQ9BQ83 275 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 DPH7Q9BTV6 452 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 IL1RL2Q9HB29 575 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 VCX3AQ9NNX9 186 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RIC8BQ9NVN3 520 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NPIPA1Q9UND3 350 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 A0A0A6YYC8 382 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 A0A0A6YYJ9 748 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NCF1BA6NI72 391 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NCF1CA8MVU1 366 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 I3L1I5 382 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC19A2O60779 497 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CRCPO75575 148 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MED26O95402 600 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 STAMBPO95630 424 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RPN2P04844 631 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ITGAMP11215 1152 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 FCGR1AP12314 374 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NCF1P14598 390 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MYF6P23409 242 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 JAK1P23458 1154 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 PSMA4P25789 261 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MST1P26927 711 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 PKLRP30613 574 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HSPA7P48741 367 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TNFSF10P50591 281 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RIPPLY3P57055 190 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 TUBA4AP68366 448 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 LIPEQ05469 1076 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 RBPJQ06330 500 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 KIAA0040Q15053 153 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 C3AR1Q16581 482 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 BTBD16Q32M84 506 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 KCTD21Q4G0X4 260 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 FCRL6Q6DN72 434 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 DLEU7Q6UYE1 221 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ZBTB49Q6ZSB9 765 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 ZFP28Q8NHY6 868 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 VPS33AQ96AX1 596 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CENPNQ96H22 339 aaPredicted RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MACROD1Q9BQ69 325 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HES7Q9BYE0 225 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CHST11Q9NPF2 352 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 PFDN4Q9NQP4 134 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CD274Q9NZQ7 290 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 PTBP2Q9UKA9 531 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 NXT1Q9UKK6 140 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 MRPS2Q9Y399 296 aaKnown RBP4.5□□□□□ -1.69
LINC00550-201ENST00000629293 CEPT1Q9Y6K0 416 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HIVEP2P31629 2446 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 HEATR5BQ9P2D3 2071 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 IGLV3-16A0A075B6K0 115 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 SLC5A10A0PJK1 596 aa4.5□□□□□ -1.69
LINC00550-201ENST00000629293 AGAP14A8MT82 685 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms