RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 KIAA0513O60268 411 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 DIRAS1O95057 198 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 PIGAP37287 484 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 TMEM164Q5U3C3 297 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 ZBTB49Q6ZSB9 765 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 TIPARPQ7Z3E1 657 aaKnown RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 CPEB2Q7Z5Q1 589 aaKnown RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 COMTD1Q86VU5 262 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 VRK2Q86Y07 508 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 NFAM1Q8NET5 270 aaPredicted RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 ADIPOR1Q96A54 375 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF300Q96RE9 604 aaPredicted RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF184Q99676 751 aaPredicted RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 SLC29A1Q99808 456 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 WDR77Q9BQA1 342 aaPredicted RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 C19orf25Q9UFG5 118 aaPredicted RBP23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 IFT52Q9Y366 437 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 LRRC42Q9Y546 428 aa23.06■■□□□ 1.28
CAPNS1-215ENST00000628018 AGAP5A6NIR3 686 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 OR6C76A6NM76 312 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 LGI1O95970 557 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 IGKV1D-16P01601 117 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 IFNW1P05000 195 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 ITGA2P17301 1181 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 RPS4Y1P22090 263 aaKnown RBP23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 PRKAR1BP31321 381 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 EBPQ15125 230 aaKnown RBP23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 GPR68Q15743 365 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 PPP4R4Q6NUP7 873 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 DHRS4L2Q6PKH6 230 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 C9orf40Q8IXQ3 194 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 PEX5LQ8IYB4 626 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 B3GNT7Q8NFL0 401 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF347Q96SE7 839 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 SEMA4CQ9C0C4 833 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 TRIM45Q9H8W5 580 aaPredicted RBP23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 CBLCQ9ULV8 474 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 ENPP4Q9Y6X5 453 aa23.05■■□□□ 1.28
CAPNS1-215ENST00000628018 PDLIM1O00151 329 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 SYT5O00445 386 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 SOCS2O14508 198 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 UMODP07911 640 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 CD63P08962 238 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 CCNYL3P0C7X3 344 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF23P17027 643 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 DRD5P21918 477 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 IST1P53990 364 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 AQP4P55087 323 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 DCAF7P61962 342 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 TARDBPQ13148 414 aaKnown RBP eCLIP23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 NNATQ16517 81 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 ZAR1Q86SH2 424 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 CARM1Q86X55 608 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 OR4D11Q8NGI4 311 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 OR2Y1Q8NGV0 311 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 DNAJC9Q8WXX5 260 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 VNN3Q9NY84 501 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 FOXJ2Q9P0K8 574 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 KCNE5Q9UJ90 142 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 PTRH2Q9Y3E5 179 aaKnown RBP23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 CHST2Q9Y4C5 530 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 AK5Q9Y6K8 562 aa23.04■■□□□ 1.28
CAPNS1-215ENST00000628018 LOC102723996A0A087X1L8 192 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 C2orf92A0A1B0GVN3 265 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 FRG2CA6NGY1 282 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 THBS1P07996 1170 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 FAM69BQ5VUD6 431 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 PAPD4Q6PIY7 484 aaKnown RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 SVOPLQ8N434 492 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 CBR4Q8N4T8 237 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 PACRGLQ8N7B6 248 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 BCORP1Q8N888 145 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 LCORQ96JN0 433 aaPredicted RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 LPAR4Q99677 370 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 WFDC6Q9BQY6 131 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 NXF5Q9H1B4 397 aaKnown RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 VCXQ9H320 206 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF232Q9UNY5 417 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF443Q9Y2A4 671 aaPredicted RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 C15orf41Q9Y2V0 281 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 OR10H1Q9Y4A9 318 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 CENPVL1A0A0U1RR11 272 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 UGT2B17O75795 530 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 DNAJB5O75953 348 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 DBIP07108 87 aaKnown RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 CEACAM1P13688 526 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 MAPK14Q16539 360 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 TMEM179BQ7Z7N9 219 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 TMPRSS12Q86WS5 348 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 LACC1Q8IV20 430 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 GALNT4Q8N4A0 578 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 APCDD1LQ8NCL9 501 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 OR5K1Q8NHB7 308 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 G6PC3Q9BUM1 346 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 B3GNT4Q9C0J1 378 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 CACYBPQ9HB71 228 aaKnown RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 C8orf4Q9NR00 106 aa23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 ZNF223Q9UK11 482 aaPredicted RBP23.03■■□□□ 1.28
CAPNS1-215ENST00000628018 G3V2T6 193 aa23.02■■□□□ 1.28
CAPNS1-215ENST00000628018 H0YJX3 145 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms