RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-215	ENST00000626422	ANK2	Q01484	3957 aa		11.21	□□□□□ -0.62
MECP2-215	ENST00000626422	YLPM1	P49750	1951 aa	Known RBP	11.21	□□□□□ -0.62
MECP2-215	ENST00000626422		A0A096LPK6	155 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	CCDC188	H7C350	402 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	OVOL3	O00110	214 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	ALDOA	P04075	364 aa	Known RBP	11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	GSTA2	P09210	222 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	TSPAN8	P19075	237 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	IL12B	P29460	328 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	IFT88	Q13099	833 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	STX5	Q13190	355 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	VEZF1	Q14119	521 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	PRSS53	Q2L4Q9	553 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	CTU2	Q2VPK5	515 aa	Known RBP	11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	PODNL1	Q6PEZ8	512 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	GGN	Q86UU5	652 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	HIPK1	Q86Z02	1210 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	C1orf52	Q8N6N3	182 aa	Known RBP	11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	DUSP19	Q8WTR2	217 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	NEUROG1	Q92886	237 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	HBEGF	Q99075	208 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	ERP44	Q9BS26	406 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	YAE1D1	Q9NRH1	226 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	WHRN	Q9P202	907 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	UTS2R	Q9UKP6	389 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	PSME2	Q9UL46	239 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	ZNF175	Q9Y473	711 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	ZNF780B	Q9Y6R6	833 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	SVEP1	Q4LDE5	3571 aa		11.2	□□□□□ -0.62
MECP2-215	ENST00000626422	NDUFS7	O75251	213 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	GUCY1B2	O75343	617 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	SOD3	P08294	240 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	CHN1	P15882	459 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	EVI2B	P34910	448 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	ACVR1B	P36896	505 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	CDKN1A	P38936	164 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	MAGEA4	P43358	317 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	EEFSEC	P57772	596 aa	Known RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	PSG6	Q00889	435 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	ZNF844	Q08AG5	666 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	UBAP2	Q5T6F2	1119 aa	Known RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	LETMD1	Q6P1Q0	360 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	MILR1	Q7Z6M3	343 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	MARCH3	Q86UD3	253 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	METTL25	Q8N6Q8	603 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	GBP7	Q8N8V2	638 aa	Predicted RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	OR7G2	Q8NG99	324 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	UHMK1	Q8TAS1	419 aa	Known RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	EXOSC8	Q96B26	276 aa	Known RBP	11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	NPAS1	Q99742	590 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	ELOVL6	Q9H5J4	265 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	RNF14	Q9UBS8	474 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	ZNF225	Q9UK10	706 aa		11.19	□□□□□ -0.62
MECP2-215	ENST00000626422	RAD51C	O43502	376 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	CD5L	O43866	347 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	GMFG	O60234	142 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	BCAS2	O75934	225 aa	Predicted RBP	11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	OPN1LW	P04000	364 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	IL3	P08700	152 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	DANCR	P0C864	163 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	IL11	P20809	199 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	KRT20	P35900	424 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	CDH13	P55290	713 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	RPS4X	P62701	263 aa	Known RBP	11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	RAE1	P78406	368 aa	Known RBP	11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	GUCY2D	Q02846	1103 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	CALCOCO2	Q13137	446 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	FGFBP1	Q14512	234 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	TSC22D1	Q15714	1073 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	SGCB	Q16585	318 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	TMEM44	Q2T9K0	475 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	GGTA1P	Q4G0N0	100 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	SH2D4B	Q5SQS7	431 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	ALKBH2	Q6NS38	261 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	PPP4R4	Q6NUP7	873 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	METTL2B	Q6P1Q9	378 aa	Known RBP	11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	APOOL	Q6UXV4	268 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	DNM1P46	Q6ZS02	220 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	ATG4D	Q86TL0	474 aa	Predicted RBP	11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	CCDC25	Q86WR0	208 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	OR6K3	Q8NGY3	331 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	SELENOM	Q8WWX9	145 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	C1GALT1C1	Q96EU7	318 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	ACTR6	Q9GZN1	396 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	VPS11	Q9H270	941 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	PFDN4	Q9NQP4	134 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	SAR1B	Q9Y6B6	198 aa		11.18	□□□□□ -0.62
MECP2-215	ENST00000626422	FREM1	Q5H8C1	2179 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	CCDC189	A1A4V9	331 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	ZSCAN12	O43309	604 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	GPRIN2	O60269	458 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	TMCC2	O75069	709 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	SS18L1	O75177	396 aa	Predicted RBP	11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	NTN1	O95631	604 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	ESRRB	O95718	433 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	IGHV4-39	P01824	125 aa		11.17	□□□□□ -0.62
MECP2-215	ENST00000626422	THBS1	P07996	1170 aa		11.17	□□□□□ -0.62

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