RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PSMA8Q8TAA3 256 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 RAB3IL1Q8TBN0 382 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 SORT1Q99523 831 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 OR2B2Q9GZK3 357 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 PRDM14Q9GZV8 571 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 FAM120CQ9NX05 1096 aaKnown RBP20.38■□□□□ 0.85
SF1-220ENST00000626028 FAM215AQ9Y5M1 114 aa20.38■□□□□ 0.85
SF1-220ENST00000626028 EMC8O43402 210 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 NKX2-2O95096 273 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 KCNH1O95259 989 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 EVI2BP34910 448 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 TRPC1P48995 793 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 CLK3P49761 638 aaKnown RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 GAS1P54826 345 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 NUP107P57740 925 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 PTGR1Q14914 329 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 TOMM20Q15388 145 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 LSM12Q3MHD2 195 aaKnown RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 DESI1Q6ICB0 168 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 RTL6Q6ICC9 239 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 NCCRP1Q6ZVX7 275 aaPredicted RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 RIMKLAQ8IXN7 391 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 ULK2Q8IYT8 1036 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 FAM83FQ8NEG4 500 aaPredicted RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 NUP43Q8NFH3 380 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 MARVELD3Q96A59 401 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 EFHD2Q96C19 240 aaPredicted RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 TIMP4Q99727 224 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 BHLHE41Q9C0J9 482 aaPredicted RBP20.37■□□□□ 0.85
SF1-220ENST00000626028 NEUROD4Q9HD90 331 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 GIN1Q9NXP7 522 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 RNF6Q9Y252 685 aa20.37■□□□□ 0.85
SF1-220ENST00000626028 MED12Q93074 2177 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 A0A1W2PRB8 838 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 TMEM120BA0PK00 339 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 NME6O75414 186 aaPredicted RBP20.36■□□□□ 0.85
SF1-220ENST00000626028 GLI4P10075 376 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 CYP4B1P13584 511 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 SRD5A2P31213 254 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 CLDN8P56748 225 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 RIPPLY2Q5TAB7 128 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 OR7A2PQ8NGA2 310 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 OR5P2Q8WZ92 322 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 C1orf50Q9BV19 199 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 C20orf27Q9GZN8 174 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 GIMAP2Q9UG22 337 aa20.36■□□□□ 0.85
SF1-220ENST00000626028 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 FADS1O60427 444 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 LAMP1P11279 417 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 CPN1P15169 458 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 BGNP21810 368 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 GRNP28799 593 aaKnown RBP20.35■□□□□ 0.85
SF1-220ENST00000626028 GABRA3P34903 492 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 GANABQ14697 944 aaKnown RBP20.35■□□□□ 0.85
SF1-220ENST00000626028 CDSNQ15517 529 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 PDCD2Q16342 344 aaPredicted RBP20.35■□□□□ 0.85
SF1-220ENST00000626028 MFSD12Q6NUT3 480 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 TRIM42Q8IWZ5 723 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 RPRMLQ8N4K4 120 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 ACBD4Q8NC06 268 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 GPR151Q8TDV0 419 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 ABTB1Q969K4 478 aaPredicted RBP20.35■□□□□ 0.85
SF1-220ENST00000626028 MOAP1Q96BY2 351 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 TLCD1Q96CP7 247 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 GIMAP5Q96F15 307 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 SERHLQ9NQF3 203 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 THAP1Q9NVV9 213 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 TNFRSF10DQ9UBN6 386 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 APCP25054 2843 aa20.35■□□□□ 0.85
SF1-220ENST00000626028 EPPINO95925 133 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 NGFRP08138 427 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 G6PDP11413 515 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 COX6B1P14854 86 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 BMP7P18075 431 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 TIMP3P35625 211 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 ZFP36L2P47974 494 aaKnown RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 PRIM2P49643 509 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 DIO3P55073 304 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 WDR4P57081 412 aaKnown RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 BST1Q10588 318 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.34■□□□□ 0.85
SF1-220ENST00000626028 EIPR1Q53HC9 387 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 WIPI1Q5MNZ9 446 aaPredicted RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 EXOSC6Q5RKV6 272 aaKnown RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 ENPP6Q6UWR7 440 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 LACC1Q8IV20 430 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 OR14L1PQ8NHC6 308 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 STACQ99469 402 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 PAIP2Q9BPZ3 127 aaKnown RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 SPOCK3Q9BQ16 436 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 UGT2B28Q9BY64 529 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 ZNF395Q9H8N7 513 aaPredicted RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 AKTIPQ9H8T0 292 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 MEAF6Q9HAF1 191 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 KCNJ16Q9NPI9 418 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 EQTNQ9NQ60 294 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 DUSP22Q9NRW4 184 aa20.34■□□□□ 0.85
SF1-220ENST00000626028 SIRT3Q9NTG7 399 aaPredicted RBP20.34■□□□□ 0.85
SF1-220ENST00000626028 NKIRAS1Q9NYS0 192 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms