RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	BTBD17	A6NE02	478 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	F2	P00734	622 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	CREB1	P16220	341 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	ELK4	P28324	431 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	AGTR1	P30556	359 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	PRKAR1B	P31321	381 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC14A2	Q15849	920 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	C9orf152	Q5JTZ5	239 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	RSPRY1	Q96DX4	576 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	BOK	Q9UMX3	212 aa	Predicted RBP	13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	RAD1	O60671	282 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	MAOB	P27338	520 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	PTGER4	P35408	488 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC18A1	P54219	525 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	HDHD5	Q9BXW7	423 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	MTG2	Q9H4K7	406 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC7A8	Q9UHI5	535 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC6A14	Q9UN76	642 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	PHLPP1	O60346	1717 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	CEBPZOS	A8MTT3	80 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	CRABP1	P29762	137 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	CLCN2	P51788	898 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	TMEM236	Q5W0B7	351 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SGPP2	Q8IWX5	399 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	FAM210A	Q96ND0	272 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	CNOT11	Q9UKZ1	510 aa	Known RBP	13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	BCL9L	Q86UU0	1499 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC6A8	P48029	635 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	HABP2	Q14520	560 aa	Predicted RBP	13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	BATF	Q16520	125 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	DCAF12	Q5T6F0	453 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	TEX26	Q8N6G2	289 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR6C4	Q8NGE1	309 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	TRMT2B	Q96GJ1	504 aa	Known RBP	13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	ARL6	Q9H0F7	186 aa		13.15	□□□□□ -0.3
NRXN1-222	ENST00000625672	P2RY2	P41231	377 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLX4IP	Q5VYV7	408 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	APCDD1	Q8J025	514 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC43A2	Q8N370	569 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZFP41	Q8N8Y5	198 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	TRIB3	Q96RU7	358 aa		13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.15	□□□□□ -0.31
NRXN1-222	ENST00000625672		A6NIZ1	184 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	MPIG6B	O95866	241 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	RAB3A	P20336	220 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	RAP1B	P61224	184 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	RAP1A	P62834	184 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	CNN3	Q15417	329 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	CNIH3	Q8TBE1	160 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TOE1	Q96GM8	510 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	DNAJB1	P25685	340 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	LGALS4	P56470	323 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC25A11	Q02978	314 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SQSTM1	Q13501	440 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	PPP1R3A	Q16821	1122 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	BSCL2	Q96G97	398 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	LRR1	Q96L50	414 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR4K3	Q96R72	315 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	GPR62	Q9BZJ7	368 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	UNKL	Q9H9P5	680 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ANKMY1	Q9P2S6	941 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	hCG_1809904	A0A1W2PP81	198 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672		A0A1W2PPE2	198 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672		A0A1W2PR64	198 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672		A0A1W2PRV1	198 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	IDH3G	P51553	393 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF33A	Q06730	810 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SPATS1	Q496A3	300 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TXNRD3NB	Q6F5E7	133 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZFAND4	Q86XD8	727 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TP63	Q9H3D4	680 aa	Predicted RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ACTB	P60709	375 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ACTG1	P63261	375 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	NADK2	Q4G0N4	442 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	HES5	Q5TA89	166 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	FAM180B	Q6P0A1	224 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	NANOG	Q9H9S0	305 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TMEM9	Q9P0T7	183 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	URB1	O60287	2271 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ADGRB2	O60241	1585 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	C17orf113	A0A1B0GUU1	675 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	CDC14C	A4D256	554 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TOR1A	O14656	332 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	PRPS1	P60891	318 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SFRP5	Q5T4F7	317 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	NDUFAF5	Q5TEU4	345 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SFXN5	Q8TD22	340 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TWSG1	Q9GZX9	223 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	ROBO1	Q9Y6N7	1651 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SCAMP2	O15127	329 aa	Known RBP	13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TIMP1	P01033	207 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	UBL4A	P11441	157 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	MAP2K4	P45985	399 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	SUOX	P51687	545 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	HES1	Q14469	280 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	TBRG1	Q3YBR2	411 aa		13.14	□□□□□ -0.31
NRXN1-222	ENST00000625672	STEAP4	Q687X5	459 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms