RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 OR4D11Q8NGI4 311 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 ACOT11Q8WXI4 607 aaPredicted RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 MUL1Q969V5 352 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 ISOC1Q96CN7 298 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 NDC1Q9BTX1 674 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 CCDC90BQ9GZT6 254 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 Q9N2J8 555 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 TESQ9UGI8 421 aaKnown RBP15.23■□□□□ 0.03
LDB3-208ENST00000623007 SRPK3Q9UPE1 567 aa15.23■□□□□ 0.03
LDB3-208ENST00000623007 A0A1B0GTQ1 180 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 CLCA1A8K7I4 914 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 ZNF99A8MXY4 864 aaPredicted RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 HCRTR1O43613 425 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 CBX7O95931 251 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 CNR2P34972 360 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 TRHRP34981 398 aaPredicted RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 SNRPNP63162 240 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 EEF1A1P68104 462 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 ROR2Q01974 943 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 ID2Q02363 134 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 NR0B2Q15466 257 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MEDAGQ5VYS4 303 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PLEKHM3Q6ZWE6 761 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 VRK2Q86Y07 508 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 GRAMD2AQ8IUY3 354 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 LACC1Q8IV20 430 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 OR52R1Q8NGF1 315 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 OR8J1Q8NGP2 316 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 CEP76Q8TAP6 659 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PIGXQ8TBF5 258 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 DIO2Q92813 273 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 NAT6Q93015 286 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 ART5Q96L15 291 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MCHR1Q99705 422 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 ZNF768Q9H5H4 540 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 TIMMDC1Q9NPL8 285 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 HCN3Q9P1Z3 774 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PILRBQ9UKJ0 227 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MKLN1Q9UL63 735 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PCDHGA10Q9Y5H3 936 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 HEMK1Q9Y5R4 338 aaPredicted RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 B4GAT1O43505 415 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 FCMRO60667 390 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 SEMA7AO75326 666 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 WBP4O75554 376 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 EPPINO95925 133 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 ANKRD34CP0C6C1 535 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 FMO3P31513 532 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 GABRA3P34903 492 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PTGER1P34995 402 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 ST13P50502 369 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 OR1D5P58170 312 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 FUT7Q11130 342 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 TMEM44Q2T9K0 475 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 SLC25A30Q5SVS4 291 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PEAR1Q5VY43 1037 aaPredicted RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 GTF2IRD2BQ6EKJ0 949 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 QSOX2Q6ZRP7 698 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PTCHD4Q6ZW05 846 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 GTF2IRD2Q86UP8 949 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 RBM45Q8IUH3 476 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 FAM181AQ8N9Y4 354 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MORN4Q8NDC4 146 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 EDAQ92838 391 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 TMIGD2Q96BF3 282 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 FOLH1BQ9HBA9 442 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 RASSF1Q9NS23 344 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MUTYHQ9UIF7 546 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 PSORS1C1Q9UIG5 152 aa15.22■□□□□ 0.03
LDB3-208ENST00000623007 MRTO4Q9UKD2 239 aaKnown RBP15.22■□□□□ 0.03
LDB3-208ENST00000623007 THADAQ6YHU6 1953 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 IRGMA1A4Y4 181 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 H3BN98 237 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 PIPP12273 146 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 GABRB1P18505 474 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 EPHA2P29317 976 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 LCN1P31025 176 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 SOX18P35713 384 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 SMSP52788 366 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 ACY1Q03154 408 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 TSPAN31Q12999 210 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 DSG2Q14126 1118 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 SEC23BQ15437 767 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 GPR68Q15743 365 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 TBCEQ15813 527 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 SYT6Q5T7P8 510 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 TMEM71Q6P5X7 295 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 ZNF836Q6ZNA1 936 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 CCDC71Q8IV32 467 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 OR4C6Q8NH72 309 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 CRELD1Q96HD1 420 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 COPS4Q9BT78 406 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 HOXD1Q9GZZ0 328 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 RACGAP1Q9H0H5 632 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 ANKRA2Q9H9E1 313 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 GPN2Q9H9Y4 310 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.21■□□□□ 0.03
LDB3-208ENST00000623007 MAN2C1Q9NTJ4 1040 aa15.21■□□□□ 0.03
LDB3-208ENST00000623007 TMEM74BQ9NUR3 256 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms