RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 APOBEC4Q8WW27 367 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 PIK3R3Q92569 461 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 NRBF2Q96F24 287 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF597Q96LX8 424 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF300Q96RE9 604 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 EPYCQ99645 322 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 OSBPL10Q9BXB5 764 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SAP130Q9H0E3 1048 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 Q9H521 79 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 REEP1Q9H902 201 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 FAM86C1Q9NVL1 165 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 COPS7AQ9UBW8 275 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SLC13A4Q9UKG4 626 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ENPP4Q9Y6X5 453 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 FER1L5A0AVI2 2057 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CUL9Q8IWT3 2517 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 GXYLT2A0PJZ3 443 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 AGAP5A6NIR3 686 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 C9J4A7 227 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 EI24O14681 340 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 KIAA0513O60268 411 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 BRINP1O60477 761 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ALOX12BO75342 701 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DNAJB5O75953 348 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DIRAS1O95057 198 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 KCNK2O95069 426 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZIC2O95409 532 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 LGI1O95970 557 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 HPRP00739 348 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 AVPP01185 164 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CLPSP04118 112 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 IGKV3-11P04433 115 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DBIP07108 87 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 THBS1P07996 1170 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CD63P08962 238 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 JMJD7P0C870 316 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF28P17035 718 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 RHCEP18577 417 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 FPR1P21462 350 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SLC5A2P31639 672 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 PPICP45877 212 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 EFNA3P52797 238 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DCAF7P61962 342 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 GK3PQ14409 553 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 PUM1Q14671 1186 aaKnown RBP eCLIP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CYP27C1Q4G0S4 372 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 EIPR1Q53HC9 387 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CCNJQ5T5M9 372 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 LCN10Q6JVE6 187 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 MRPL14Q6P1L8 145 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SHQ1Q6PI26 577 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 TSEN54Q7Z6J9 526 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ANKRD37Q7Z713 158 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 STK32CQ86UX6 486 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 CARM1Q86X55 608 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF619Q8N2I2 560 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF721Q8TF20 911 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 MR1Q95460 341 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 RMND5BQ96G75 393 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 NAF1Q96HR8 494 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 TAAR9Q96RI9 348 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 PIP5K1AQ99755 562 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 G6PC3Q9BUM1 346 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 DDA1Q9BW61 102 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 OSBPL11Q9BXB4 747 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 AMBRA1Q9C0C7 1298 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 KLHL28Q9NXS3 571 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 C19orf25Q9UFG5 118 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 C3orf18Q9UK00 162 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 MKLN1Q9UL63 735 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 RAB26Q9ULW5 256 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 LRCH1Q9Y2L9 728 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 GPR55Q9Y2T6 319 aaPredicted RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 SAMHD1Q9Y3Z3 626 aaKnown RBP6.49□□□□□ -1.37
CBWD3-219ENST00000622817 OR10H1Q9Y4A9 318 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 MUC6Q6W4X9 2439 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
CBWD3-219ENST00000622817 USP34Q70CQ2 3546 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 PRAMEF25A6NGN4 478 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 OR6C76A6NM76 312 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
CBWD3-219ENST00000622817 CT45A8P0DMV1 189 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 CT45A9P0DMV2 189 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 UQCRBP14927 111 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 IL7RP16871 459 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 ITIH1P19827 911 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 DRD5P21918 477 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 RPS4Y1P22090 263 aaKnown RBP6.48□□□□□ -1.37
CBWD3-219ENST00000622817 RRM2P31350 389 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 PIGAP37287 484 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 ETV5P41161 510 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 ALDH3A2P51648 485 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 IST1P53990 364 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 PSMD4P55036 377 aaKnown RBP6.48□□□□□ -1.37
CBWD3-219ENST00000622817 SMIM11AP58511 58 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 DAG1Q14118 895 aa6.48□□□□□ -1.37
CBWD3-219ENST00000622817 GPR68Q15743 365 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms