RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	TLE2	Q04725	743 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	PDE7A	Q13946	482 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	NXPE4	Q6UWF7	544 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	OR52H1	Q8NGJ2	320 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	ABCG4	Q9H172	646 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	KLHL1	Q9NR64	748 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	TMEM5	Q9Y2B1	443 aa		13.52	□□□□□ -0.24
SYNRG-231	ENST00000622045	HLA-DPB1	P04440	258 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	MPP7	Q5T2T1	576 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	TMEM25	Q86YD3	366 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SORCS1	Q8WY21	1168 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SGTB	Q96EQ0	304 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF354B	Q96LW1	612 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	POLDIP3	Q9BY77	421 aa	Known RBP	13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	KCNK12	Q9HB15	430 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	DLL4	Q9NR61	685 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	MRPL39	Q9NYK5	338 aa	Known RBP	13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	PLAGL1	Q9UM63	463 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	RASD1	Q9Y272	281 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	CKAP5	Q14008	2032 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	MYO10	Q9HD67	2058 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC5A10	A0PJK1	596 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	AHCY	P23526	432 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	PPP2R1B	P30154	601 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC6A11	P48066	632 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	KIAA1024L	P59773	190 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	ARHGAP15	Q53QZ3	475 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	SIAH3	Q8IW03	269 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR9A1P	Q8NGU1	263 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	CYB5D2	Q8WUJ1	264 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	UBE2E3	Q969T4	207 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR2AG1	Q9H205	316 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	PHF11	Q9UIL8	331 aa		13.52	□□□□□ -0.25
SYNRG-231	ENST00000622045	MMP20	O60882	483 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	GATB	O75879	557 aa	Known RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ALDOB	P05062	364 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ACP2	P11117	423 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SHC1	P29353	583 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	AKR1D1	P51857	326 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SYPL1	Q16563	259 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ESPNL	Q6ZVH7	1005 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	HTR3D	Q70Z44	454 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR2A12	Q8NGT7	310 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TEX47	Q8TBZ9	253 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ARHGAP9	Q9BRR9	750 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	OSGEPL1	Q9H4B0	414 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	FLVCR2	Q9UPI3	526 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ASF1A	Q9Y294	204 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	KCNMB2	Q9Y691	235 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ALPK3	Q96L96	1907 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A0G2JN53	185 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A1W2PQ45	241 aa	Predicted RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A1W2PQY0	241 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	C7orf66	A4D0T2	115 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	CHURC1-FNTB	B4DL54	471 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	KHNYN	O15037	678 aa	Known RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	NPC1	O15118	1278 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	HPX	P02790	462 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	LCN1	P31025	176 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	FGF9	P31371	208 aa	Predicted RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	PTGER1	P34995	402 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC1A3	P43003	542 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	GRIN2C	Q14957	1233 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	STPG2	Q8N412	459 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TOMM5	Q8N4H5	51 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR5P2	Q8WZ92	322 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	F2RL3	Q96RI0	385 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	YIPF4	Q9BSR8	244 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	BRD7	Q9NPI1	651 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TET1	Q8NFU7	2136 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045		A0A0B4J203	849 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC19A2	O60779	497 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TPMT	P51580	245 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	GAS1	P54826	345 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TAP2	Q03519	686 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ZNF273	Q14593	569 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	CLVS2	Q5SYC1	327 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	CD276	Q5ZPR3	534 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	ALKAL2	Q6UX46	152 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	GAREM2	Q75VX8	874 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	HDDC2	Q7Z4H3	204 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	IZUMO1	Q8IYV9	350 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	KRT78	Q8N1N4	520 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	PLA2G15	Q8NCC3	412 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	OR5D16	Q8NGK9	328 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	HMGB4	Q8WW32	186 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SFXN2	Q96NB2	322 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	TREX2	Q9BQ50	279 aa	Predicted RBP	13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	IFT46	Q9NQC8	304 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	SLC13A4	Q9UKG4	626 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	BAIAP2	Q9UQB8	552 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	HRH3	Q9Y5N1	445 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	FKBP7	Q9Y680	259 aa		13.51	□□□□□ -0.25
SYNRG-231	ENST00000622045	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	LEFTY2	O00292	366 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	H2AFB2	P0C5Z0	115 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	PITPNB	P48739	271 aa		13.5	□□□□□ -0.25
SYNRG-231	ENST00000622045	ARHGDIB	P52566	201 aa		13.5	□□□□□ -0.25

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