RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RYKP34925 604 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 MAP2K4P45985 399 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 DGCR6Q14129 220 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 ZBED5Q49AG3 693 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 PODNL1Q6PEZ8 512 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 GALNT12Q8IXK2 581 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 OR2L13Q8N349 312 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 RIT1Q92963 219 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 DGAT2Q96PD7 388 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 PINK1Q9BXM7 581 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 ALOXE3Q9BYJ1 711 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 PLGRKTQ9HBL7 147 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 DHCR7Q9UBM7 475 aaKnown RBP9.27□□□□□ -0.93
VTA1-205ENST00000620996 NDRG4Q9ULP0 352 aaKnown RBP9.27□□□□□ -0.93
VTA1-205ENST00000620996 RNF6Q9Y252 685 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 CACNA1IQ9P0X4 2223 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 CLDN4O14493 209 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 PCDHGA12O60330 932 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 CYP7B1O75881 506 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 NTN1O95631 604 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 KRT20P35900 424 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 SMIM11AP58511 58 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 OCA2Q04671 838 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 CEBPEQ15744 281 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 NPTX1Q15818 432 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 C1orf189Q5VU69 101 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 ZNF605Q86T29 641 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 TSPYL5Q86VY4 417 aaPredicted RBP9.27□□□□□ -0.93
VTA1-205ENST00000620996 CCDC71Q8IV32 467 aaPredicted RBP9.27□□□□□ -0.93
VTA1-205ENST00000620996 ENTHD1Q8IYW4 607 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 SPARTQ8N0X7 666 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 CLIP4Q8N3C7 705 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 SLC25A45Q8N413 288 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 C7orf57Q8NEG2 295 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 C1orf216Q8TAB5 229 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 SLC7A13Q8TCU3 470 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 IL4I1Q96RQ9 567 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 BTBD2Q9BX70 525 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 UCK2Q9BZX2 261 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 POLR2J3Q9H1A7 115 aaKnown RBP9.27□□□□□ -0.93
VTA1-205ENST00000620996 BCL2L10Q9HD36 194 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 FBXO34Q9NWN3 711 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 MAT2BQ9NZL9 334 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 PCDHGA6Q9Y5G7 932 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 KLK4Q9Y5K2 254 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 GXYLT2A0PJZ3 443 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 FAAHO00519 579 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 FOXS1O43638 330 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 DPM1O60762 260 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 LGI1O95970 557 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 PSMB9P28065 219 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 SSTR4P31391 388 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
VTA1-205ENST00000620996 LARS2Q15031 903 aaKnown RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 DCST2Q5T1A1 773 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 LAIR2Q6ISS4 152 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 KLHL17Q6TDP4 642 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 GRAMD2AQ8IUY3 354 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 ANKRD9Q96BM1 317 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 PHOX2BQ99453 314 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 NAA50Q9GZZ1 169 aaKnown RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 C19orf53Q9UNZ5 99 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 WDR87Q6ZQQ6 2873 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 CENPVL1A0A0U1RR11 272 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 HRKO00198 91 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 ASNA1O43681 348 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 PRKNO60260 465 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 AGR2O95994 175 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 GGT2P36268 569 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 MAN2A2P49641 1150 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 NUP107P57740 925 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 CDC42P60953 191 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 CSTF1Q05048 431 aaKnown RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 PTGES3Q15185 160 aaKnown RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 ZNHIT3Q15649 155 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 PRTGQ2VWP7 1150 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 LAIR1Q6GTX8 287 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 ZNF730Q6ZMV8 503 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 FRRS1Q6ZNA5 592 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 PTCHD4Q6ZW05 846 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 GPR135Q8IZ08 494 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 IQCF1Q8N6M8 205 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 CDRT4Q8N9R6 151 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 OR51Q1Q8NH59 317 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 ELF4Q99607 663 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 COQ7Q99807 217 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 GABARAPL3Q9BY60 117 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 EPB41L1Q9H4G0 881 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 PNO1Q9NRX1 252 aaKnown RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 ATXN7L1Q9ULK2 861 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 A4GNTQ9UNA3 340 aa9.26□□□□□ -0.93
VTA1-205ENST00000620996 ZNF443Q9Y2A4 671 aaPredicted RBP9.26□□□□□ -0.93
VTA1-205ENST00000620996 IGHV1OR21-1A0A087WYE8 117 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 PEX12O00623 359 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 LAMTOR5O43504 91 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
VTA1-205ENST00000620996 EPPINO95925 133 aa9.25□□□□□ -0.93
VTA1-205ENST00000620996 ATP1B1P05026 303 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms