RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 C9orf106Q8NAJ2 232 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 OR14L1PQ8NHC6 308 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 METTL2AQ96IZ6 378 aaKnown RBP19.99■□□□□ 0.79
SRRT-218ENST00000620394 BBS4Q96RK4 519 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 TUBA1CQ9BQE3 449 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 YIPF4Q9BSR8 244 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 G6PC3Q9BUM1 346 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 TNFRSF12AQ9NP84 129 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 FBXL2Q9UKC9 423 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 C19orf53Q9UNZ5 99 aaPredicted RBP19.99■□□□□ 0.79
SRRT-218ENST00000620394 CCL27Q9Y4X3 112 aa19.99■□□□□ 0.79
SRRT-218ENST00000620394 PLOD2O00469 737 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 CD53P19397 219 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 PRPH2P23942 346 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 GRK2P25098 689 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 KRT20P35900 424 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 MC3RP41968 323 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 LHX2P50458 406 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 NKX6-1P78426 367 aaPredicted RBP19.98■□□□□ 0.79
SRRT-218ENST00000620394 MRPS22P82650 360 aaKnown RBP19.98■□□□□ 0.79
SRRT-218ENST00000620394 IMPG1Q17R60 797 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 SPDYAQ5MJ70 313 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 SLC44A2Q8IWA5 706 aaPredicted RBP19.98■□□□□ 0.79
SRRT-218ENST00000620394 TRIM42Q8IWZ5 723 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 OR2L13Q8N349 312 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 OR4N2Q8NGD1 307 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 ZNF395Q9H8N7 513 aaPredicted RBP19.98■□□□□ 0.79
SRRT-218ENST00000620394 MIEF1Q9NQG6 463 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 OXSMQ9NWU1 459 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 TAS2R10Q9NYW0 307 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 CLCF1Q9UBD9 225 aa19.98■□□□□ 0.79
SRRT-218ENST00000620394 JUNP05412 331 aaKnown RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 ZNF708P17019 499 aa19.97■□□□□ 0.79
SRRT-218ENST00000620394 CCT5P48643 541 aa19.97■□□□□ 0.79
SRRT-218ENST00000620394 NCBP2P52298 156 aaKnown RBP eCLIP19.97■□□□□ 0.79
SRRT-218ENST00000620394 CLDN18P56856 261 aa19.97■□□□□ 0.79
SRRT-218ENST00000620394 C2orf80Q0P641 193 aa19.97■□□□□ 0.79
SRRT-218ENST00000620394 ZNF155Q12901 538 aaPredicted RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 EFHD2Q96C19 240 aaPredicted RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 ZNF764Q96H86 408 aaPredicted RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 SFXN3Q9BWM7 321 aa19.97■□□□□ 0.79
SRRT-218ENST00000620394 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 POLR3HQ9Y535 204 aaPredicted RBP19.97■□□□□ 0.79
SRRT-218ENST00000620394 EEF1E1-BLOC1S5C9J1V9 151 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 H0Y3Z8 333 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 ARHGEF9O43307 516 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 EEF1E1O43324 174 aaKnown RBP19.96■□□□□ 0.79
SRRT-218ENST00000620394 TMIGD3P0DMS9 266 aaPredicted RBP19.96■□□□□ 0.79
SRRT-218ENST00000620394 UROSP10746 265 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 CHMP24386 653 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 NTSP30990 170 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 EVI2BP34910 448 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 KIAA0040Q15053 153 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 CYP27C1Q4G0S4 372 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 NOXRED1Q6NXP6 359 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 AAGABQ6PD74 315 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 TMEM107Q6UX40 140 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 RNF165Q6ZSG1 346 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 PRIMA1Q86XR5 153 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 FADS6Q8N9I5 356 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 CDC26Q8NHZ8 85 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 LINC01560Q8TB33 94 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 WNT2BQ93097 391 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 COX4I2Q96KJ9 171 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 AMDHD1Q96NU7 426 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 TM9SF2Q99805 663 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 GLIPR2Q9H4G4 154 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 ABCG2Q9UNQ0 655 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 OR10H1Q9Y4A9 318 aa19.96■□□□□ 0.79
SRRT-218ENST00000620394 UPK1AO00322 258 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 HCRTR2O43614 444 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 CRCPO75575 148 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 RCBTB2O95199 551 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 HRGP04196 525 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 CFAP157Q5JU67 520 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 LIPMQ5VYY2 423 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 FCRL1Q96LA6 429 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 SFXN2Q96NB2 322 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 LMF2Q9BU23 707 aaKnown RBP19.95■□□□□ 0.78
SRRT-218ENST00000620394 DKKL1Q9UK85 242 aa19.95■□□□□ 0.78
SRRT-218ENST00000620394 PCNX3Q9H6A9 2034 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 FADS1O60427 444 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 ZIC3O60481 467 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 CPA3P15088 417 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 DPP4P27487 766 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 B3GALT5-AS1P59052 145 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 SLC18A2Q05940 514 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 FOXF2Q12947 444 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 Q5PR19 223 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 CXorf67Q86X51 503 aaPredicted RBP19.94■□□□□ 0.78
SRRT-218ENST00000620394 EPS8L3Q8TE67 593 aaKnown RBP19.94■□□□□ 0.78
SRRT-218ENST00000620394 UBLCP1Q8WVY7 318 aaPredicted RBP19.94■□□□□ 0.78
SRRT-218ENST00000620394 SMPDL3BQ92485 455 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 ELP4Q96EB1 424 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 MDFIQ99750 246 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 C12orf65Q9H3J6 166 aaKnown RBP19.94■□□□□ 0.78
SRRT-218ENST00000620394 ACBD3Q9H3P7 528 aa19.94■□□□□ 0.78
SRRT-218ENST00000620394 DDX18Q9NVP1 670 aaKnown RBP19.94■□□□□ 0.78
SRRT-218ENST00000620394 JMJD1CQ15652 2540 aa19.93■□□□□ 0.78
SRRT-218ENST00000620394 C17orf51A8MQB3 221 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms