RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PRSS44E7EML9 344 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 NUPL2O15504 423 aaKnown RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 GPR37L1O60883 481 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 TOXO94900 526 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 RHOCP08134 193 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 MPC1LP0DKB6 136 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 GPR85P60893 370 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 RPS7P62081 194 aaKnown RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 BDH1Q02338 343 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 BCL2L1Q07817 233 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF763Q0D2J5 394 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 PTPRRQ15256 657 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 ZXDCQ2QGD7 858 aaPredicted RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 SPDYE7PQ495Y7 208 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 RTP2Q5QGT7 225 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 CD300LGQ6UXG3 332 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 BAIAP2L2Q6UXY1 529 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 RNF175Q8N4F7 328 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 CELF5Q8N6W0 485 aaKnown RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 ZFP41Q8N8Y5 198 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 SKA2Q8WVK7 121 aaPredicted RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 FBXO32Q969P5 355 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 GAS2L1Q99501 681 aaPredicted RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 VN1R3Q9BXE9 311 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 C1QTNF6Q9BXI9 259 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 TMPRSS13Q9BYE2 586 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 MS4A7Q9GZW8 240 aaPredicted RBP10.18□□□□□ -0.78
UPF3A-212ENST00000619079 IL26Q9NPH9 171 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 FAM8A1Q9UBU6 413 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 ACAD8Q9UKU7 415 aa10.18□□□□□ -0.78
UPF3A-212ENST00000619079 G3V3Q6 166 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF593O00488 134 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SYN3O14994 580 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 LRRTM2O43300 516 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ADAM11O75078 769 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 CXCL14O95715 111 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 EIF4EP06730 217 aaKnown RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZP1P60852 638 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 DYRK1AQ13627 763 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PRSS55Q6UWB4 352 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 DEFB123Q8N688 67 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 POGLUT1Q8NBL1 392 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 GPR26Q8NDV2 337 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 OR4K1Q8NGD4 311 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PPCDCQ96CD2 204 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ELMOD3Q96FG2 381 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 LCORQ96JN0 433 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 FUZQ9BT04 418 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PCDHB8Q9UN66 801 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 A0A1W2PRQ8 180 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PLSCR5A0PG75 271 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 CD8B2A6NJW9 211 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 KDM4EB2RXH2 506 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SIGLEC6O43699 453 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 RP2O75695 350 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 UBL3O95164 117 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 TFP02787 698 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 CTSAP10619 480 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 CD8BP10966 210 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 NFYAP23511 347 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SPAM1P38567 509 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SLC11A2P49281 568 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 MMP15P51511 669 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PNLIPRP1P54315 467 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 RAP2BP61225 183 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF177Q13360 481 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 TSC22D1Q15714 1073 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 GPR68Q15743 365 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 MPEG1Q2M385 716 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 MPP7Q5T2T1 576 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SDHAF4Q5VUM1 108 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 METTL11BQ5VVY1 283 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SEZ6L2Q6UXD5 910 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SIAH3Q8IW03 269 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 LRRC56Q8IYG6 542 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ADGRG2Q8IZP9 1017 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 FBXO15Q8NCQ5 510 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 TEX47Q8TBZ9 253 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 FANK1Q8TC84 345 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SLC7A13Q8TCU3 470 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 CXorf58Q96LI9 332 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 C12orf66Q96MD2 445 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ABHD1Q96SE0 405 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 SECISBP2Q96T21 854 aaKnown RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 DDOQ99489 341 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZBP1Q9H171 429 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PRM3Q9NNZ6 103 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PTGFRNQ9P2B2 879 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 RPS6KB2Q9UBS0 482 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 FBXW2Q9UKT8 454 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ACSL6Q9UKU0 697 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 MRPS7Q9Y2R9 242 aaKnown RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 ZFP37Q9Y6Q3 630 aaPredicted RBP10.17□□□□□ -0.78
UPF3A-212ENST00000619079 PLXNA4Q9HCM2 1894 aa10.17□□□□□ -0.78
UPF3A-212ENST00000619079 C2orf92A0A1B0GVN3 265 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 KPNA3O00505 521 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms