RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 RFXANKO14593 260 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SEMA7AO75326 666 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TNFRSF21O75509 655 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 TUSC2O75896 110 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PSMB4P28070 264 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PRDX3P30048 256 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 CSNK1A1P48729 337 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 NAGLUP54802 743 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ARFRP1Q13795 201 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 C16orf47Q6ZP98 133 aaPredicted RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 SGPP2Q8IWX5 399 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 SLC35G2Q8TBE7 412 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 PITPNM3Q9BZ71 974 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 ONECUT1Q9UBC0 465 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 C14orf166Q9Y224 244 aaKnown RBP3.16□□□□□ -1.9
LPP-220ENST00000617246 PTPRDP23468 1912 aa3.16□□□□□ -1.9
LPP-220ENST00000617246 A0A0J9YYE9 177 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 LGALS8O00214 317 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TBX10O75333 385 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PNMTP11086 282 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SRD5A1P18405 259 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 CDK3Q00526 305 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ZNF267Q14586 743 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 GXYLT1Q4G148 440 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 AGKQ53H12 422 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 THOC6Q86W42 341 aaKnown RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 MN1Q10571 1320 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 METTL12A8MUP2 240 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TRAPPC2LH3BP13 241 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 K7EQM0 130 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 UBDO15205 165 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PEX2P28328 305 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PCGF2P35227 344 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 GPR6P46095 362 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 GSCP56915 257 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 DAG1Q14118 895 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 KCNAB1Q14722 419 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ZNF718Q3SXZ3 478 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PLK5Q496M5 336 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ZNF730Q6ZMV8 503 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 KLHL15Q96M94 604 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 MGME1Q9BQP7 344 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ULBP2Q9BZM5 246 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SLC26A1Q9H2B4 701 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 OR6C2Q9NZP2 312 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 LEF1Q9UJU2 399 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 WDR45Q9Y484 360 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TRIM43BA6NCK2 446 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 RAF1P04049 648 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 MYOGP15173 224 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TLE4Q04727 773 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 NECTIN1Q15223 517 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 LRRC36Q1X8D7 754 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 DCBLD1Q8N8Z6 715 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TRIM43Q96BQ3 446 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 S100PBPQ96BU1 408 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SCGNO76038 276 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ZNF23P17027 643 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PPP1CCP36873 323 aaKnown RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 PKNOX1P55347 436 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 RAB38P57729 211 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ST3GAL3Q11203 375 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 DYRK1AQ13627 763 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TANGO2Q6ICL3 276 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 PLEKHA7Q6IQ23 1121 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 FAM166AQ6J272 317 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 WBP2Q969T9 261 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 MARVELD3Q96A59 401 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SGCZQ96LD1 299 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 GINS3Q9BRX5 216 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 RBCK1Q9BYM8 510 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ARL5AQ9Y689 179 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 LRP5LA4QPB2 252 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 CREG1O75629 220 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 XRCC1P18887 633 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 GRIA3P42263 894 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SLC35A1P78382 337 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 TPBGQ13641 420 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 SWI5Q1ZZU3 235 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 CLVS2Q5SYC1 327 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 ZNF684Q5T5D7 378 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 FAM69AQ5T7M9 428 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 NIPAL3Q6P499 406 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 C12orf49Q9H741 205 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 KCNMB3Q9NPA1 279 aa3.15□□□□□ -1.9
LPP-220ENST00000617246 FBXO6Q9NRD1 293 aaPredicted RBP3.15□□□□□ -1.9
LPP-220ENST00000617246 CD8B2A6NJW9 211 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SLC22A20A6NK97 555 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SUV39H1O43463 412 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 LILRA1O75019 489 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SULT1C4O75897 302 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 DRD5P21918 477 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ETV3P41162 512 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FASLGP48023 281 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 PJVKQ0ZLH3 352 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ZNF542PQ5EBM4 170 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 GCNT6Q5T4J0 391 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RPS19BP1Q86WX3 136 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 LACC1Q8IV20 430 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 OR51G2Q8NGK0 314 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms